RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TDRG1Q3Y452 100 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 RIPPLY2Q5TAB7 128 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 FADS6Q8N9I5 356 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 CPEB3Q8NE35 698 aaKnown RBP8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 DYRK2Q92630 601 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 EXTL1Q92935 676 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 TECTBQ96PL2 329 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 METTL7AQ9H8H3 244 aa8.84□□□□□ -0.99
CHRNA1-202ENST00000348749 PIGBOS1A0A0B4J2F0 54 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 C2orf72A6NCS6 295 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 EPOPA6NHQ4 379 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 MLNRO43193 412 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 NXPH1P58417 271 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 PPP1CBP62140 327 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 TMEM267Q0VDI3 215 aaPredicted RBP8.83□□□□□ -1
CHRNA1-202ENST00000348749 CST9LP1Q5W188 147 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 Q6ZPA2 131 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 Q6ZS49 121 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 LHFPL2Q6ZUX7 228 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 DTX1Q86Y01 620 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 OR4B1Q8NGF8 309 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 LHX4Q969G2 390 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 SLC39A9Q9NUM3 307 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 PAM16Q9Y3D7 125 aa8.83□□□□□ -1
CHRNA1-202ENST00000348749 CCDC163A0A0D9SF12 145 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 A0A1W2PN81 502 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 KIAA1324LA8MWY0 1029 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 H0Y980 276 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 M0R135 149 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 ANGPTL7O43827 346 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 MMP23AO75900 390 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 NDUFB8O95169 186 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 PDGFBP01127 241 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 ATXN8OSP0DMR3 200 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 GLB1P16278 677 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 CHRNA7P36544 502 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 YPEL3P61236 119 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 RAC1P63000 192 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 CFHR1Q03591 330 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 FOXL1Q12952 345 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 SHBQ15464 509 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 SRSF7Q16629 238 aaKnown RBP eCLIP8.82□□□□□ -1
CHRNA1-202ENST00000348749 CARD17Q5XLA6 110 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 TSTD1Q8NFU3 115 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 NAT6Q93015 286 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 ZNF799Q96GE5 643 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 UBE2ZQ9H832 354 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 SLC45A2Q9UMX9 530 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 WIPI2Q9Y4P8 454 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 TIMM9Q9Y5J7 89 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 CUL9Q8IWT3 2517 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 A0A0U1RQK1 487 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 A0A1B0GUS0 222 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 ZNF320A2RRD8 509 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 HS3ST1O14792 307 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 CCL25O15444 150 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 PDCD6O75340 191 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 OR2J2O76002 312 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 NXPH3O95157 252 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 CNOT4O95628 575 aaKnown RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 TOMM40O96008 361 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 COMPP49747 757 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 PTTG1IPP53801 180 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 FAM78BQ5VT40 261 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 ZNF818PQ6ZRF7 136 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 C20orf196Q8IYI0 205 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 KCNE4Q8WWG9 221 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 NABP1Q96AH0 204 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 CIB3Q96Q77 187 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 WDR61Q9GZS3 305 aaKnown RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 SLC7A10Q9NS82 523 aa8.82□□□□□ -1
CHRNA1-202ENST00000348749 C19orf25Q9UFG5 118 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 NCOA6Q14686 2063 aaPredicted RBP8.82□□□□□ -1
CHRNA1-202ENST00000348749 IGHV3-20A0A0C4DH32 117 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 A0A1W2PNR3 127 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 ZNF814B7Z6K7 855 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 SHISA8B8ZZ34 492 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 DHHO43323 396 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 SPRY1O43609 319 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 DKK1O94907 266 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 OPN1LWP04000 364 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 ADMP35318 185 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 CTRLP40313 264 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 CLDN17P56750 224 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 HBG1P69891 147 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 HBG2P69892 147 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 MALLQ13021 153 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 RAB30Q15771 203 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 KIAA2026Q5HYC2 2103 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 SPIN3Q5JUX0 258 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 FAM27BQ5VT28 67 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 C16orf47Q6ZP98 133 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 OSR2Q8N2R0 312 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 TP53TG3Q9ULZ0 132 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 CHD3Q12873 2000 aaKnown RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1-27A0A075B6S5 117 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 F5H5K5 113 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 H3BP45 60 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms