RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 PILRBQ9UKJ0 227 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 SIRPB1O00241 398 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
SMTN-202ENST00000347557 ZNF25P17030 456 aaPredicted RBP12.45□□□□□ -0.42
SMTN-202ENST00000347557 CA6P23280 308 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 ID3Q02535 119 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 NMSQ5H8A3 153 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 SPANXN5Q5MJ07 72 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 OR2T2Q6IF00 324 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 TCFL5Q9UL49 500 aa12.45□□□□□ -0.42
SMTN-202ENST00000347557 RHBDL1O75783 438 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 TUSC2O75896 110 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 TUBG1P23258 451 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 F2RP25116 425 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CEACAM6P40199 344 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 Q6ZRM9 215 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 ZNF610Q8N9Z0 462 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CLDN23Q96B33 292 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 PLSCR2Q9NRY7 297 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 GOLT1BQ9Y3E0 138 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CD300LBA8K4G0 201 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CEBPZOSA8MTT3 80 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 UCP1P25874 307 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 ELOBQ15370 118 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 TRIM61Q5EBN2 209 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 HLA-CQ95604 372 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 RPRMQ9NS64 109 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 ATP23Q9Y6H3 246 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 ARHGAP21Q5T5U3 1957 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 NCKAP5O14513 1909 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 NAPSAO96009 420 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CD200P41217 278 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 PAX9P55771 341 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CEACAM21Q3KPI0 293 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 ABLIM2Q6H8Q1 611 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 NECAP1Q8NC96 275 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 CLDND2Q8NHS1 167 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 PLPPR1Q8TBJ4 325 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 REPIN1Q9BWE0 567 aaKnown RBP12.44□□□□□ -0.42
SMTN-202ENST00000347557 RNF150Q9ULK6 438 aa12.44□□□□□ -0.42
SMTN-202ENST00000347557 TAS2R30P59541 319 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 NKX6-1P78426 367 aaPredicted RBP12.43□□□□□ -0.42
SMTN-202ENST00000347557 PLP2Q04941 152 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 RIPPLY2Q5TAB7 128 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 PMS2CLQ68D20 193 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 ZNF880Q6PDB4 577 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 C11orf1Q9H5F2 150 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 PSENENQ9NZ42 101 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 ANKRD30BLA7E2S9 258 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 DNPH1O43598 174 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 CYTIPO60759 359 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 SYNGR4O95473 234 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 MMP9P14780 707 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 SELEP16581 610 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 MCEMP1Q8IX19 187 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 PRDM14Q9GZV8 571 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
SMTN-202ENST00000347557 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 TRAPPC2LQ9UL33 140 aa12.43□□□□□ -0.42
SMTN-202ENST00000347557 COL6A3P12111 3177 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 DEGS1O15121 323 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 SOX15O60248 233 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 PAX1P15863 534 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 MAGEA5P43359 124 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 HLA-DRB3P79483 266 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 PLGLB1Q02325 96 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 OR5T1Q8NG75 326 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 GAB2Q9UQC2 676 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
SMTN-202ENST00000347557 MRPL30Q8TCC3 161 aaKnown RBP12.42□□□□□ -0.42
SMTN-202ENST00000347557 CT55Q8WUE5 264 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
SMTN-202ENST00000347557 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 HBE1P02100 147 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 HOXA5P20719 270 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 IL24Q13007 206 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 TESK1Q15569 626 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 DCAF12Q5T6F0 453 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 TECTBQ96PL2 329 aa12.42□□□□□ -0.42
SMTN-202ENST00000347557 H0Y980 276 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 FABP4P15090 132 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 LMO1P25800 156 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 ARL16Q0P5N6 197 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 TIPARPQ7Z3E1 657 aaKnown RBP12.41□□□□□ -0.42
SMTN-202ENST00000347557 OR5D13Q8NGL4 314 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 BOKQ9UMX3 212 aaPredicted RBP12.41□□□□□ -0.42
SMTN-202ENST00000347557 TRAV24A0A0B4J272 114 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 EREGO14944 169 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 PPP1R2P9O14990 202 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 DFFBO76075 338 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HSPB1P04792 205 aaKnown RBP12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 NPSP0C0P6 89 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms