RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GADD45AP24522 165 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 LOXL3P58215 753 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 QRFPP83859 136 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 HTD2P86397 168 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 C2orf76Q3KRA6 126 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 C22orf42Q6IC83 251 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 OR10V1Q8NGI7 309 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 OR1L1Q8NH94 360 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 MRPL30Q8TCC3 161 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 HSF4Q9ULV5 492 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 STUB1Q9UNE7 303 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 MOB4Q9Y3A3 225 aa12.64□□□□□ -0.39
TSPAN4-201ENST00000346501 ANK2Q01484 3957 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 NBEAL1Q6ZS30 2694 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 VEGFCP49767 419 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 CLDN12P56749 244 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 C9orf152Q5JTZ5 239 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 SLC25A48Q6ZT89 311 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 TGIF2LXQ8IUE1 241 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 FAM89BQ8N5H3 189 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 KCNK15Q9H427 330 aa12.63□□□□□ -0.39
TSPAN4-201ENST00000346501 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 SOCS1O15524 211 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 FBXO24O75426 580 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 CSF1P09603 554 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 FGF9P31371 208 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 REG1BP48304 166 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 BLCAPP62952 87 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 HABP2Q14520 560 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 MORN2Q502X0 79 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 UTF1Q5T230 341 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 CENPVQ7Z7K6 275 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 TPRA1Q86W33 373 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 LYG1Q8N1E2 194 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 OR2AK2Q8NG84 335 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 OR2T10Q8NGZ9 312 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 GFI1Q99684 422 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 MMP27Q9H306 513 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
TSPAN4-201ENST00000346501 FAM90A9PA6NNJ1 464 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 HSPA12AO43301 675 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 YPEL1O60688 119 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 CD3GP09693 182 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 HNF4GQ14541 408 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 RTN4IP1Q8WWV3 396 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 RAB3CQ96E17 227 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 KCTD7Q96MP8 289 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 YPEL2Q96QA6 119 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 ABHD14AQ9BUJ0 271 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 SERTAD4Q9NUC0 356 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 TXNL4BQ9NX01 149 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 AK3Q9UIJ7 227 aa12.61□□□□□ -0.39
TSPAN4-201ENST00000346501 TMEM272A0A1B0GTI8 110 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 FGF16O43320 207 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 TNFAIP8O95379 198 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 NAPSAO96009 420 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 RAB6AP20340 208 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 CD1BP29016 333 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 PPP1CCP36873 323 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 HMGN3Q15651 99 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 NEDD8Q15843 81 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 TIMM50Q3ZCQ8 353 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 LY6G6FQ5SQ64 297 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 C11orf44Q8N8P7 122 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 OR52L2PQ8NGH6 319 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 ARHGAP5-AS1Q96IT6 56 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 PECRQ9BY49 303 aa12.6□□□□□ -0.39
TSPAN4-201ENST00000346501 A0A087WXM4 84 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 TRBV6-6A0A0A6YYG2 114 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 NCBP2LA6PVI3 153 aaKnown RBP12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 NOTOA8MTQ0 251 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 SCGNO76038 276 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 MOSP00540 346 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 ZBTB25P24278 435 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 TALDO1P37837 337 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 ZNF137PP52743 207 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 OR10A3P58181 314 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 DIAPH2-AS1Q14236 149 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 OR4X2Q8NGF9 303 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 OR8H1Q8NGG4 311 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 EDARADDQ8WWZ3 215 aa12.59□□□□□ -0.39
TSPAN4-201ENST00000346501 CFHR4Q92496 578 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms