RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 C1QTNF9BB2RNN3 333 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 SH2D1BO14796 132 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 HSPA12AO43301 675 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
UPF3B-202ENST00000345865 IGKV1-5P01602 117 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 CBR1P16152 277 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 HMGN3Q15651 99 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 MOB1BQ7L9L4 216 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 COMMD1Q8N668 190 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 AIFM2Q9BRQ8 373 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 HES4Q9HCC6 221 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 OBP2BQ9NPH6 170 aa13.02□□□□□ -0.33
UPF3B-202ENST00000345865 H7C2Y5 167 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 AQP7O14520 342 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 GPR37O15354 613 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 HAND1O96004 215 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 WNT2P09544 360 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 MMP9P14780 707 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 CEACAM6P40199 344 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 AKIRIN2Q53H80 203 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 OR10Z1Q8NGY1 313 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 ESRP2Q9H6T0 727 aaKnown RBP13.01□□□□□ -0.33
UPF3B-202ENST00000345865 FBXO7Q9Y3I1 522 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 HEATR1Q9H583 2144 aaKnown RBP13.01□□□□□ -0.33
UPF3B-202ENST00000345865 A0A1B0GU03 582 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 WRBO00258 174 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 WDR1O75083 606 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 S100GP29377 79 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 SPSB3Q6PJ21 355 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 Q6ZR03 302 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 CACNG5Q9UF02 275 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 USF3Q68DE3 2245 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 ZNF318Q5VUA4 2279 aa13.01□□□□□ -0.33
UPF3B-202ENST00000345865 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
UPF3B-202ENST00000345865 PTPRBP23467 1997 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 FLI1Q01543 452 aaPredicted RBP13□□□□□ -0.33
UPF3B-202ENST00000345865 PEA15Q15121 130 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 DRAM1Q8N682 238 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 OR8G5Q8NG78 346 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 TAAR6Q96RI8 345 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 RARRES2Q99969 163 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 DKK4Q9UBT3 224 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 KCNS2Q9ULS6 477 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 RBM7Q9Y580 266 aaKnown RBP13□□□□□ -0.33
UPF3B-202ENST00000345865 BSNQ9UPA5 3926 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 TRAV17A0A0B4J275 112 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 TMEM210A6NLX4 147 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 COLCA2A8K830 154 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 TSPAN9O75954 239 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 CECR9P0C854 216 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 SLC25A6P12236 298 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 ZNF16P17020 682 aaPredicted RBP13□□□□□ -0.33
UPF3B-202ENST00000345865 BAXQ07812 192 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 PRAMEF6Q5VXH4 476 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 OR1L1Q8NH94 360 aa13□□□□□ -0.33
UPF3B-202ENST00000345865 SMG1Q96Q15 3661 aaKnown RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 TXNL1O43396 289 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 CNOT4O95628 575 aaKnown RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 CRYBA1P05813 215 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 TMEM267Q0VDI3 215 aaPredicted RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 DEFB109BQ30KR1 87 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 SP5Q6BEB4 398 aaPredicted RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 ACAA1P09110 424 aaPredicted RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 FABP6P51161 128 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 AESQ08117 197 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 ACSF3Q4G176 576 aaPredicted RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 ZNF610Q8N9Z0 462 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 LSM10Q969L4 123 aaKnown RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 C5orf30Q96GV9 206 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 OPN3Q9H1Y3 402 aaPredicted RBP12.99□□□□□ -0.33
UPF3B-202ENST00000345865 UFSP2Q9NUQ7 469 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
UPF3B-202ENST00000345865 ZNF292O60281 2723 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 C12orf77C9JDV5 145 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 TNFSF13O75888 250 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
UPF3B-202ENST00000345865 OR3A1P47881 315 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 AWAT1Q58HT5 328 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 RNASE11Q8TAA1 199 aaKnown RBP12.98□□□□□ -0.33
UPF3B-202ENST00000345865 SARAFQ96BY9 339 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 COQ2Q96H96 371 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 ATP5SQ99766 215 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 C20orf24Q9BUV8 137 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 PLSCR4Q9NRQ2 329 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 MLXQ9UH92 298 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 RNF150Q9ULK6 438 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 PRELID3BQ9Y3B1 194 aa12.98□□□□□ -0.33
UPF3B-202ENST00000345865 UMAD1C9J7I0 102 aa12.97□□□□□ -0.33
UPF3B-202ENST00000345865 IAPPP10997 89 aa12.97□□□□□ -0.33
UPF3B-202ENST00000345865 ARL16Q0P5N6 197 aa12.97□□□□□ -0.33
UPF3B-202ENST00000345865 WDR82Q6UXN9 313 aa12.97□□□□□ -0.33
UPF3B-202ENST00000345865 SEM1Q6ZVN7 128 aa12.97□□□□□ -0.33
UPF3B-202ENST00000345865 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
UPF3B-202ENST00000345865 CADP27708 2225 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms