RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLC23A3Q6PIS1 610 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 SLC25A34Q6PIV7 304 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 MARS2Q96GW9 593 aaKnown RBP15.72■□□□□ 0.11
SMC4-201ENST00000344722 DHRS7CA6NNS2 312 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.72■□□□□ 0.11
SMC4-201ENST00000344722 OR8I2Q8N0Y5 310 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 OR5A2Q8NGI9 324 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 LMX1BO60663 402 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 AMY1AP04745 511 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 SRSF5Q13243 272 aaKnown RBP15.72■□□□□ 0.11
SMC4-201ENST00000344722 NR2C2APQ86WQ0 139 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 TM4SF19Q96DZ7 209 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 OR4C12Q96R67 309 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 RBKSQ9H477 322 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 GNG10P50151 68 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 TMEM116Q8NCL8 245 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 STXBP6Q8NFX7 210 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 SMIM12Q96EX1 92 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 PARLQ9H300 379 aa15.72■□□□□ 0.11
SMC4-201ENST00000344722 SRP19P09132 144 aaKnown RBP15.71■□□□□ 0.11
SMC4-201ENST00000344722 CCL2P13500 99 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 ORM2P19652 201 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 RNF122Q9H9V4 155 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 G6PC2Q9NQR9 355 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 IL36GQ9NZH8 169 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 RALYQ9UKM9 306 aaKnown RBP15.71■□□□□ 0.11
SMC4-201ENST00000344722 TMEM250H0YL14 139 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 LCN2P80188 198 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 SSX8Q7RTT4 187 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 OR8A1Q8NGG7 326 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 REG4Q9BYZ8 158 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 VENTXO95231 258 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 SMIM17P0DL12 118 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 FAM206AQ9NX38 181 aa15.71■□□□□ 0.11
SMC4-201ENST00000344722 ARID1AO14497 2285 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 C5orf52A6NGY3 159 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 J3QT63 122 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 LURAP1LQ8IV03 231 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 OR2Z1Q8NG97 314 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 SARAFQ96BY9 339 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 CXXC4Q9H2H0 198 aa15.71■□□□□ 0.1
SMC4-201ENST00000344722 F8VVB4 439 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 F8VWA3 439 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 RBPJQ06330 500 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 PSMG3Q9BT73 122 aaPredicted RBP15.7■□□□□ 0.1
SMC4-201ENST00000344722 UCP3P55916 312 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 BIVMQ86UB2 503 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 OR52L2PQ8NGH6 319 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 OR10S1Q8NGN2 331 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 OR1B1Q8NGR6 318 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 APOBEC4Q8WW27 367 aaKnown RBP15.7■□□□□ 0.1
SMC4-201ENST00000344722 PRNDQ9UKY0 176 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 OR2T8A6NH00 312 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A26D6RGX4 464 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 NPY1RP25929 384 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 IBA57Q5T440 356 aaKnown RBP15.7■□□□□ 0.1
SMC4-201ENST00000344722 C10orf113Q5VZT2 155 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 C5orf17Q8NAS9 161 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 Q8WTZ3 238 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 NEUROG3Q9Y4Z2 214 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 PXMP4Q9Y6I8 212 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 ADRA2AP08913 450 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 ERVFRD-1P60508 538 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 TGIF2LYQ8IUE0 185 aa15.7■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A10PA6NDY2 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A18PA6NE21 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A16PA6NEW6 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A20PA6NIJ5 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A8PA6NJQ4 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A7PA6NKC0 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A22PA8MWA6 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A12PA8MX19 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A5PA8MXJ8 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A23PA8MXZ1 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A15PP0C7V4 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A13PP0C7W8 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A14PP0C7W9 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 FAM90A24PP0C7X0 464 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 LHX8Q68G74 356 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 LRRC29Q8WV35 223 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 QTRT1Q9BXR0 403 aaKnown RBP15.69■□□□□ 0.1
SMC4-201ENST00000344722 OPN3Q9H1Y3 402 aaPredicted RBP15.69■□□□□ 0.1
SMC4-201ENST00000344722 NPVFQ9HCQ7 196 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 COA4Q9NYJ1 87 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 SRSF3P84103 164 aaKnown RBP15.69■□□□□ 0.1
SMC4-201ENST00000344722 KCNK17Q96T54 332 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 SMAD4Q13485 552 aaKnown RBP15.69■□□□□ 0.1
SMC4-201ENST00000344722 GPR146Q96CH1 333 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 IGHV1OR21-1A0A087WYE8 117 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 OR2I1PQ8NGU4 316 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 VSTM2AQ8TAG5 236 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 ZCCHC14Q8WYQ9 949 aaKnown RBP15.69■□□□□ 0.1
SMC4-201ENST00000344722 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
SMC4-201ENST00000344722 SEBOXQ9HB31 216 aaPredicted RBP15.69■□□□□ 0.1
SMC4-201ENST00000344722 ZNF785A8K8V0 405 aa15.68■□□□□ 0.1
SMC4-201ENST00000344722 S100A4P26447 101 aaKnown RBP15.68■□□□□ 0.1
SMC4-201ENST00000344722 C9orf40Q8IXQ3 194 aa15.68■□□□□ 0.1
SMC4-201ENST00000344722 COL10A1Q03692 680 aa15.68■□□□□ 0.1
SMC4-201ENST00000344722 PERPQ96FX8 193 aa15.68■□□□□ 0.1
SMC4-201ENST00000344722 PGLYRP1O75594 196 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms