RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 ODAMA1E959 279 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 RNF222A6NCQ9 220 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 L7N2F9 121 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 ATP6V1G1O75348 118 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 IGHV3-7P01780 117 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 EDDM3BP56851 147 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 LINC00205P59089 165 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 RAB32Q13637 225 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 OPCMLQ14982 345 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 ZNF546Q86UE3 836 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 SLC35G3Q8N808 338 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 GALMQ96C23 342 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
CDC42-202ENST00000344548 NMES1Q9C002 83 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 OR5AC2Q9NZP5 309 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 FLNCQ14315 2725 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 POM121CA8CG34 1229 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TCF23Q7RTU1 214 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 OR51H1Q8NH63 302 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 ITLN2Q8WWU7 325 aaPredicted RBP11.28□□□□□ -0.6
CDC42-202ENST00000344548 SDSLQ96GA7 329 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 C2orf50Q96LR7 162 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 KCNIP1Q9NZI2 227 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 EPG5Q9HCE0 2579 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 USF3Q68DE3 2245 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 MGST3O14880 152 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 PSMB6P28072 239 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 IL2RGP31785 369 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 RND3P61587 244 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 PAX5Q02548 391 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 EFNB3Q15768 340 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 IAH1Q2TAA2 248 aaPredicted RBP11.28□□□□□ -0.6
CDC42-202ENST00000344548 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 ZNF788Q6ZQV5 615 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TMUB2Q71RG4 321 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 CCDC71LQ8N9Z2 235 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 BVESQ8NE79 360 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 OR52M1Q8NGK5 317 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 ERGIC1Q969X5 290 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TMEM222Q9H0R3 208 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TNFSF18Q9UNG2 199 aa11.28□□□□□ -0.6
CDC42-202ENST00000344548 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 PRB1P04280 392 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 SLC25A4P12235 298 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 LUMP51884 338 aaPredicted RBP11.27□□□□□ -0.61
CDC42-202ENST00000344548 P2RX3P56373 397 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 ZNF672Q499Z4 452 aaPredicted RBP11.27□□□□□ -0.61
CDC42-202ENST00000344548 FAM209AQ5JX71 171 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 TEX261Q6UWH6 196 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 LYPD2Q6UXB3 125 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 FOXRED2Q8IWF2 684 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 MUC15Q8N387 334 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 LURAP1Q96LR2 239 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.61
CDC42-202ENST00000344548 DIRC2Q96SL1 478 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 SUCNR1Q9BXA5 334 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 ARL6Q9H0F7 186 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 DNTTIP1Q9H147 329 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
CDC42-202ENST00000344548 OR2S2Q9NQN1 319 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 COMMD9Q9P000 198 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 U3KQ87 197 aa11.27□□□□□ -0.61
CDC42-202ENST00000344548 MSGN1A6NI15 193 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 CGB3P0DN86 165 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 CGB7P0DN87 165 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 DRAM1Q8N682 238 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 PCNPQ8WW12 178 aaKnown RBP11.26□□□□□ -0.61
CDC42-202ENST00000344548 TMEM106BQ9NUM4 274 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 B9A039 149 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 TMPRSS2O15393 492 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 LY6HO94772 140 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 IRF2P14316 349 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 RPA2P15927 270 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 F2RP25116 425 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 S100A11P31949 105 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 FGL1Q08830 312 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 TMEM65Q6PI78 240 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 SELENOHQ8IZQ5 122 aaKnown RBP11.26□□□□□ -0.61
CDC42-202ENST00000344548 ZNF561Q8N587 486 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 ZNF680Q8NEM1 530 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 ABHD14BQ96IU4 210 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 KCNS2Q9ULS6 477 aa11.26□□□□□ -0.61
CDC42-202ENST00000344548 UBE2J1Q9Y385 318 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms