RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SLC38A6Q8IZM9 456 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 ZBTB8BQ8NAP8 495 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 OR5M8Q8NGP6 311 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 OR2T35Q8NGX2 323 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 Q8TCH9 128 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 C1orf159Q96HA4 380 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 PIPOXQ9P0Z9 390 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 OPN4Q9UHM6 478 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 PCDHB10Q9UN67 800 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 WIPI2Q9Y4P8 454 aa11.23□□□□□ -0.61
HERPUD1-202ENST00000344114 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 PPYP01298 95 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 OR4A8P0C604 315 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 AADACP22760 399 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 ATXN7L3Q14CW9 347 aaPredicted RBP11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 C2orf68Q2NKX9 166 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 GCSAMQ8N6F7 178 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 CCDC71LQ8N9Z2 235 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 OR11L1Q8NGX0 322 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 COQ8AQ8NI60 647 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 CASTOR1Q8WTX7 329 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 TOMM40LQ969M1 308 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 CHIAQ9BZP6 476 aa11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
HERPUD1-202ENST00000344114 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 DBX1A6NMT0 343 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 C17orf100A8MU93 164 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 M0R233 179 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 SNAPC5O75971 98 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 TGFAP01135 160 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 LHBP01229 141 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 SCTP09683 121 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 EGR1P18146 543 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 TNFRSF1AP19438 455 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 PI3P19957 117 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 CEBPDP49716 269 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 H2BFSP57053 126 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 FXYD4P59646 89 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 SUPT4H1P63272 117 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 COL10A1Q03692 680 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 SRSF4Q08170 494 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 HERPUD1Q15011 391 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 HMGN3Q15651 99 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 ABCA11PQ4W5N1 156 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 FAM209AQ5JX71 171 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 SGPP2Q8IWX5 399 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 FAM185AQ8N0U4 392 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 OR5T2Q8NGG2 359 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 PPP1R35Q8TAP8 253 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 RSRP1Q9BUV0 290 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 TMPRSS13Q9BYE2 586 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 RNF7Q9UBF6 113 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 DNAJB11Q9UBS4 358 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 TRAPPC2LQ9UL33 140 aa11.21□□□□□ -0.61
HERPUD1-202ENST00000344114 G3V3Q6 166 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 BET1O15155 118 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 PSPNO60542 156 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 TUSC2O75896 110 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 PSG2P11465 335 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 RPS2P15880 293 aaKnown RBP11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 NFYAP23511 347 aaPredicted RBP11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 OR3A1P47881 315 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 DCAF12L2Q5VW00 463 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 TRAT1Q6PIZ9 186 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 EGLN1Q9GZT9 426 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 GCM1Q9NP62 436 aa11.2□□□□□ -0.62
HERPUD1-202ENST00000344114 TRBV6-7A0A0A0MS04 114 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 TEX13DA0A0J9YY54 714 aaPredicted RBP11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 OOEPA6NGQ2 149 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 SIX6O95475 246 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 IRF2P14316 349 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 RCC1P18754 421 aaPredicted RBP11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 PRDX2P32119 198 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 SERPINF1P36955 418 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 RBMXP38159 391 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 PIGPP57054 158 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 RND3P61587 244 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 SLC9A3R2Q15599 337 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 EFNB3Q15768 340 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 SPRNQ5BIV9 151 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 H1FOOQ8IZA3 346 aaPredicted RBP11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 C9orf62Q8N4C0 152 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 ASCC1Q8N9N2 400 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 GALNT14Q96FL9 552 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 KIRREL1Q96J84 757 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 SNX22Q96L94 193 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms