RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PPP1R3CQ9UQK1 317 aa16.7■□□□□ 0.26
RTN1-202ENST00000342503 POLEQ07864 2286 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 RPS10-NUDT3A0A1W2PQS6 291 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 SPDEFO95238 335 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 CDS2O95674 445 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 SCGB1D2O95969 90 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 F2RP25116 425 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 SSTR5P35346 364 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 CCL8P80075 99 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 TLE1Q04724 770 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 GNMTQ14749 295 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 CDSNQ15517 529 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 ZCCHC24Q8N2G6 241 aaKnown RBP16.69■□□□□ 0.26
RTN1-202ENST00000342503 LSM5Q9Y4Y9 91 aaKnown RBP16.69■□□□□ 0.26
RTN1-202ENST00000342503 DSCAMO60469 2012 aa16.69■□□□□ 0.26
RTN1-202ENST00000342503 MEX3AA1L020 520 aaKnown RBP16.68■□□□□ 0.26
RTN1-202ENST00000342503 K7N7A8 449 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 CD3EP07766 207 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 IRF2P14316 349 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 TNFRSF1AP19438 455 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 S100A1P23297 94 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 NUP62P37198 522 aaPredicted RBP16.68■□□□□ 0.26
RTN1-202ENST00000342503 UBA52P62987 128 aaKnown RBP16.68■□□□□ 0.26
RTN1-202ENST00000342503 CLLU1Q5K131 121 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 STUMQ69YW2 141 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 TRAT1Q6PIZ9 186 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 ALKAL2Q6UX46 152 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 OR52M1Q8NGK5 317 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 OR5D13Q8NGL4 314 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 ARL11Q969Q4 196 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 TOLLIPQ9H0E2 274 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 NDRG3Q9UGV2 375 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 ZZEF1O43149 2961 aa16.68■□□□□ 0.26
RTN1-202ENST00000342503 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.67■□□□□ 0.26
RTN1-202ENST00000342503 ODAMA1E959 279 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 MSGN1A6NI15 193 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 C15orf65H3BRN8 121 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 MBPP02686 304 aaPredicted RBP16.67■□□□□ 0.26
RTN1-202ENST00000342503 SMCO1Q147U7 214 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 DEFB108BQ8NET1 73 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 OR51H1Q8NH63 302 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 ST8SIA2Q92186 375 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 ARPC5LQ9BPX5 153 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 DCAF16Q9NXF7 216 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 NCOR2Q9Y618 2525 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 DEDDO75618 318 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 WNT2P09544 360 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 RFESDQ8TAC1 157 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 SCARB1Q8WTV0 552 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 AQP10Q96PS8 301 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 ZNF471Q9BX82 626 aaPredicted RBP16.67■□□□□ 0.26
RTN1-202ENST00000342503 GSX2Q9BZM3 304 aa16.67■□□□□ 0.26
RTN1-202ENST00000342503 DUXBA0A1W2PPF3 345 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 K7EPK0 472 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 RLN2P04090 185 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 SELLP14151 372 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 PPP1CCP36873 323 aaKnown RBP16.66■□□□□ 0.26
RTN1-202ENST00000342503 RAB14P61106 215 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 ESCO2Q56NI9 601 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 ZNF561Q8N587 486 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 FAM71E2Q8N5Q1 922 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 DRAM1Q8N682 238 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 NINJ1Q92982 152 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 RBPMSQ93062 196 aaKnown RBP16.66■□□□□ 0.26
RTN1-202ENST00000342503 IL22RA2Q969J5 263 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 SDSLQ96GA7 329 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 RNF150Q9ULK6 438 aa16.66■□□□□ 0.26
RTN1-202ENST00000342503 IGHV3-43A0A0B4J1X8 118 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 A0A1B0GW55 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 LINC00862A6NCI5 91 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 F5H0A9 414 aaPredicted RBP16.65■□□□□ 0.26
RTN1-202ENST00000342503 SPINT2O43291 252 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L2P0CJ85 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L3P0CJ86 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L4P0CJ87 422 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L5P0CJ88 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L6P0CJ89 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L7P0CJ90 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 IGHV3-43DP0DP04 118 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 P2RX3P56373 397 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 TEX36Q5VZQ5 186 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4L9Q6RFH8 374 aaPredicted RBP16.65■□□□□ 0.26
RTN1-202ENST00000342503 GALNT11Q8NCW6 608 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 OR4D5Q8NGN0 318 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 FAM210AQ96ND0 272 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 GAFA1Q96PS6 74 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 EGLN1Q9GZT9 426 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 OR2S2Q9NQN1 319 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 DUX4Q9UBX2 424 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 MED19A0JLT2 244 aaPredicted RBP16.65■□□□□ 0.26
RTN1-202ENST00000342503 PLAUP00749 431 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 GYPAP02724 150 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 EDDM3BP56851 147 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 ZNF645Q8N7E2 425 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 CA5BP1Q8WTZ4 195 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 LRRC46Q96FV0 321 aa16.65■□□□□ 0.26
RTN1-202ENST00000342503 CHD8Q9HCK8 2581 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 TUBAL3A6NHL2 446 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 LRRC30A6NM36 301 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms