RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PRSS54Q6PEW0 395 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 ZNF474Q6S9Z5 364 aaPredicted RBP11.15□□□□□ -0.62
COL18A1-201ENST00000342220 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 OR2Z1Q8NG97 314 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 NTNG2Q96CW9 530 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
COL18A1-201ENST00000342220 IGKV1-12A0A0C4DH73 117 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 IGKV1D-12P01611 117 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 OTX1P32242 354 aaPredicted RBP11.14□□□□□ -0.63
COL18A1-201ENST00000342220 UCP2P55851 309 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 S100A10P60903 97 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 NAAAQ02083 359 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 PNLIPRP3Q17RR3 467 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 MST1LQ2TV78 715 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 GPHA2Q96T91 129 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 CEACAM18A8MTB9 384 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 IGHV3-13P01766 116 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 CRYAAP02489 173 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 KHDC3LQ587J8 217 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 CRIP3Q6Q6R5 217 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 PEG10Q86TG7 708 aaKnown RBP11.14□□□□□ -0.63
COL18A1-201ENST00000342220 LRP11Q86VZ4 500 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 LHFPL1Q86WI0 220 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 SSC4DQ8WTU2 575 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
COL18A1-201ENST00000342220 MMP24Q9Y5R2 645 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 PPP1R2P9O14990 202 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
COL18A1-201ENST00000342220 TNFSF13O75888 250 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 NXPH2O95156 264 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 TMEM11P17152 192 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 CCL1P22362 96 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 CAV2P51636 162 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 HIST2H3AQ71DI3 136 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 C19orf12Q9NSK7 152 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 POLQO75417 2590 aa11.14□□□□□ -0.63
COL18A1-201ENST00000342220 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 CD200P41217 278 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF674Q2M3X9 581 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 TPRX1Q8N7U7 411 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 Q8NA96 180 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 KIRREL1Q96J84 757 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 CEACAM4O75871 244 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 RPS2P15880 293 aaKnown RBP11.13□□□□□ -0.63
COL18A1-201ENST00000342220 FUT6P51993 359 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 HIST1H3AP68431 136 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 HIST2H3PS2Q5TEC6 136 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 OSR2Q8N2R0 312 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 KLF14Q8TD94 323 aaPredicted RBP11.13□□□□□ -0.63
COL18A1-201ENST00000342220 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 PECRQ9BY49 303 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 PTPN13Q12923 2485 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 CCL21O00585 134 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 PSG7Q13046 419 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 FAM201AQ5SY85 155 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 FOXL2NBQ6ZUU3 175 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 FAM89BQ8N5H3 189 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 POC1AQ8NBT0 407 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 SCGB3A2Q96PL1 93 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 NDUFAF3Q9BU61 184 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 SLC5A7Q9GZV3 580 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 V9GYS6 101 aa11.13□□□□□ -0.63
COL18A1-201ENST00000342220 WNT9BO14905 357 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 PMELP40967 661 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 GABRA2P47869 451 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 SULT1A1P50225 295 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 EDDM3AQ14507 147 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 SPIN3Q5JUX0 258 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 RPL7L1Q6DKI1 246 aaKnown RBP11.12□□□□□ -0.63
COL18A1-201ENST00000342220 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 C1QTNF5Q9BXJ0 243 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 LPAR3Q9UBY5 353 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 A8MWP6 167 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 LYL1P12980 280 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 AKR1C8PQ5T2L2 129 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 IGF2-ASQ6U949 168 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 CD300LFQ8TDQ1 290 aa11.12□□□□□ -0.63
COL18A1-201ENST00000342220 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
COL18A1-201ENST00000342220 A0A0G2JNJ9 132 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 A6NNC1 897 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 SOD3P08294 240 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 TAS2R46P59540 309 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 RBPJQ06330 500 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 LHFPL2Q6ZUX7 228 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 HPSE2Q8WWQ2 592 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 RAB24Q969Q5 203 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 SPSB1Q96BD6 273 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 Q9UFV3 132 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 NKX2-6A6NCS4 301 aa11.11□□□□□ -0.63
COL18A1-201ENST00000342220 FOXI3A8MTJ6 420 aaPredicted RBP11.11□□□□□ -0.63
COL18A1-201ENST00000342220 ZNF705GA8MUZ8 300 aaPredicted RBP11.11□□□□□ -0.63
COL18A1-201ENST00000342220 DLEU1O43261 78 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms