RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 EN2P19622 333 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF140P52738 457 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 P2RY12Q9H244 342 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 RBPJLQ9UBG7 517 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 A0A1W2PRU2 124 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PAPLNO95428 1278 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 LAIR2Q6ISS4 152 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 Q6ZS49 121 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 RNF133Q8WVZ7 376 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SIGLEC7Q9Y286 467 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SLC17A2O00624 439 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TIMM23O14925 209 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PYY3Q5JQD4 70 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 KIRREL2Q6UWL6 708 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 C6orf201Q7Z4U5 140 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ZSCAN4Q8NAM6 433 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ATP1B3P54709 279 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ROM1Q03395 351 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 LIPFP07098 398 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM183AQ8IXX5 376 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM19Q96HH6 336 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SSBP4Q9BWG4 385 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 STARD4Q96DR4 205 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 DUSP23Q9BVJ7 150 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 LCATP04180 440 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 DCAF10Q5QP82 559 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 SLC38A5Q8WUX1 472 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 UPRTQ96BW1 309 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 KLRF1Q9NZS2 232 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 DANCRP0C864 163 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 FGF5P12034 268 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PPIFP30405 207 aaKnown RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CAMPP49913 170 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 KHDC1LQ5JSQ8 128 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 WNT2P09544 360 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 OR1L3Q8NH93 324 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 OR6C1Q96RD1 312 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CFHR5Q9BXR6 569 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CA10Q9NS85 328 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GAGE2BQ13066 116 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GAGE2EQ4V326 116 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TM4SF18Q96CE8 201 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 IL17CQ9P0M4 197 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 GAGE2DQ9UEU5 116 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 BOKQ9UMX3 212 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PSMB11A5LHX3 300 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 AGFG2O95081 481 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 F11P03951 625 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CEACAM1P13688 526 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 PPICP45877 212 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 NSDHLQ15738 373 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 Q96M85 177 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ABHD3Q8WU67 409 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 METRNQ9UJH8 293 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ACTL6AO96019 429 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 ELAVL4P26378 380 aaKnown RBP3.11□□□□□ -1.91
SYNE1-201ENST00000341594 OR8B8Q15620 311 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 DEFB134Q4QY38 66 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 Q6ZS92 163 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 CALHM1Q8IU99 346 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 TMEM251Q8N6I4 163 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 FNDC9Q8TBE3 224 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 HHLA2Q9UM44 414 aa3.11□□□□□ -1.91
SYNE1-201ENST00000341594 RENP00797 406 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 GNG4P50150 75 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 PCBP4P57723 403 aaKnown RBP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 MLANAQ16655 118 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SLC25A26Q70HW3 274 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 ULBP2Q9BZM5 246 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 MANBALQ9NQG1 85 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 OR4A8P0C604 315 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 AADACP22760 399 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 RHBDD2Q6NTF9 364 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 CMTM1Q8IZ96 169 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 NUP43Q8NFH3 380 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 CHRNA10Q9GZZ6 450 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 K7ESM1 405 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 FCGR3AP08637 254 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 RPS11P62280 158 aaKnown RBP eCLIP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 PRSS54Q6PEW0 395 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 EID2BQ96D98 161 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 NAGKQ9UJ70 344 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 MCTS1Q9ULC4 181 aaKnown RBP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 FAM208BQ5VWN6 2430 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3-66A0A0C4DH42 116 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 TNFSF11O14788 317 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 GABRA6Q16445 453 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 AGTRAPQ6RW13 159 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 CLEC1AQ8NC01 280 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 CYSLTR1Q9Y271 337 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3-43A0A0B4J1X8 118 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 C5orf63A6NC05 138 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 SPINT1O43278 529 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 MPC2O95563 127 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 IGHV3-43DP0DP04 118 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 DMKNQ6E0U4 476 aaPredicted RBP3.1□□□□□ -1.91
SYNE1-201ENST00000341594 GUCD1Q96NT3 240 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 WNT10AQ9GZT5 417 aa3.1□□□□□ -1.91
SYNE1-201ENST00000341594 LHX9Q9NQ69 397 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms