RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
RET-201ENST00000340058 NPIPB13A6NJU9 1138 aa12.62□□□□□ -0.39
RET-201ENST00000340058 NPIPB4C9JG80 1138 aa12.62□□□□□ -0.39
RET-201ENST00000340058 CD59P13987 128 aa12.62□□□□□ -0.39
RET-201ENST00000340058 NIT2Q9NQR4 276 aa12.62□□□□□ -0.39
RET-201ENST00000340058 SLC35D1Q9NTN3 355 aa12.62□□□□□ -0.39
RET-201ENST00000340058 V9GYS6 101 aa12.62□□□□□ -0.39
RET-201ENST00000340058 hADV38S2A0JD32 116 aa12.62□□□□□ -0.39
RET-201ENST00000340058 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
RET-201ENST00000340058 MSGN1A6NI15 193 aa12.62□□□□□ -0.39
RET-201ENST00000340058 PPP1R2P9O14990 202 aa12.62□□□□□ -0.39
RET-201ENST00000340058 MBPP02686 304 aaPredicted RBP12.62□□□□□ -0.39
RET-201ENST00000340058 CD3EP07766 207 aa12.62□□□□□ -0.39
RET-201ENST00000340058 NAT2P11245 290 aa12.62□□□□□ -0.39
RET-201ENST00000340058 F2RP25116 425 aa12.62□□□□□ -0.39
RET-201ENST00000340058 ATP6V0CP27449 155 aa12.62□□□□□ -0.39
RET-201ENST00000340058 GLIPR1P48060 266 aa12.62□□□□□ -0.39
RET-201ENST00000340058 OVCH2Q7RTZ1 564 aa12.62□□□□□ -0.39
RET-201ENST00000340058 MISP3Q96FF7 219 aa12.62□□□□□ -0.39
RET-201ENST00000340058 TUBG2Q9NRH3 451 aa12.62□□□□□ -0.39
RET-201ENST00000340058 RNF7Q9UBF6 113 aa12.62□□□□□ -0.39
RET-201ENST00000340058 LPAR3Q9UBY5 353 aa12.62□□□□□ -0.39
RET-201ENST00000340058 ZNF107Q9UII5 783 aaPredicted RBP12.62□□□□□ -0.39
RET-201ENST00000340058 LOC102723996A0A087X1L8 192 aa12.61□□□□□ -0.39
RET-201ENST00000340058 NTN3O00634 580 aaPredicted RBP12.61□□□□□ -0.39
RET-201ENST00000340058 NEURL1O76050 574 aa12.61□□□□□ -0.39
RET-201ENST00000340058 FHITP49789 147 aa12.61□□□□□ -0.39
RET-201ENST00000340058 C5orf24Q7Z6I8 188 aa12.61□□□□□ -0.39
RET-201ENST00000340058 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
RET-201ENST00000340058 POM121L2Q96KW2 1035 aa12.61□□□□□ -0.39
RET-201ENST00000340058 RSG1Q9BU20 258 aa12.61□□□□□ -0.39
RET-201ENST00000340058 OR6C3Q9NZP0 311 aa12.61□□□□□ -0.39
RET-201ENST00000340058 RANBP2P49792 3224 aaKnown RBP12.61□□□□□ -0.39
RET-201ENST00000340058 SYNGR3O43761 229 aa12.61□□□□□ -0.39
RET-201ENST00000340058 TECTAO75443 2155 aa12.61□□□□□ -0.39
RET-201ENST00000340058 NQO2P16083 231 aa12.61□□□□□ -0.39
RET-201ENST00000340058 OPRK1P41145 380 aa12.61□□□□□ -0.39
RET-201ENST00000340058 KCNJ3P48549 501 aa12.61□□□□□ -0.39
RET-201ENST00000340058 TNFSF10P50591 281 aa12.61□□□□□ -0.39
RET-201ENST00000340058 SUB1P53999 127 aaKnown RBP eCLIP12.61□□□□□ -0.39
RET-201ENST00000340058 ASPHD2Q6ICH7 369 aa12.61□□□□□ -0.39
RET-201ENST00000340058 DTD1Q8TEA8 209 aa12.61□□□□□ -0.39
RET-201ENST00000340058 DCTN5Q9BTE1 182 aa12.61□□□□□ -0.39
RET-201ENST00000340058 WIPI2Q9Y4P8 454 aa12.61□□□□□ -0.39
RET-201ENST00000340058 SONP18583 2426 aaKnown RBP12.61□□□□□ -0.39
RET-201ENST00000340058 H0Y8G0 127 aa12.61□□□□□ -0.39
RET-201ENST00000340058 B3GALNT1O75752 331 aa12.61□□□□□ -0.39
RET-201ENST00000340058 FAM87AP0C7U9 286 aa12.61□□□□□ -0.39
RET-201ENST00000340058 MDH2P40926 338 aaKnown RBP12.61□□□□□ -0.39
RET-201ENST00000340058 LAMTOR1Q6IAA8 161 aa12.61□□□□□ -0.39
RET-201ENST00000340058 ZCCHC24Q8N2G6 241 aaKnown RBP12.61□□□□□ -0.39
RET-201ENST00000340058 RPEQ96AT9 228 aa12.61□□□□□ -0.39
RET-201ENST00000340058 TLN1Q9Y490 2541 aaKnown RBP12.61□□□□□ -0.39
RET-201ENST00000340058 A0A1W2PPH5 198 aa12.6□□□□□ -0.39
RET-201ENST00000340058 LRRC3CA6NJW4 275 aa12.6□□□□□ -0.39
RET-201ENST00000340058 PROB1E7EW31 1015 aa12.6□□□□□ -0.39
RET-201ENST00000340058 ARL3P36405 182 aa12.6□□□□□ -0.39
RET-201ENST00000340058 RAB5CP51148 216 aa12.6□□□□□ -0.39
RET-201ENST00000340058 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
RET-201ENST00000340058 FLI1Q01543 452 aaPredicted RBP12.6□□□□□ -0.39
RET-201ENST00000340058 NCR3LG1Q68D85 454 aa12.6□□□□□ -0.39
RET-201ENST00000340058 BAGE3Q86Y29 109 aa12.6□□□□□ -0.39
RET-201ENST00000340058 BAGE2Q86Y30 109 aa12.6□□□□□ -0.39
RET-201ENST00000340058 ZNRF1Q8ND25 227 aa12.6□□□□□ -0.39
RET-201ENST00000340058 ABHD14AQ9BUJ0 271 aa12.6□□□□□ -0.39
RET-201ENST00000340058 TRAF4Q9BUZ4 470 aaPredicted RBP12.6□□□□□ -0.39
RET-201ENST00000340058 OOEPA6NGQ2 149 aa12.6□□□□□ -0.39
RET-201ENST00000340058 TUBAL3A6NHL2 446 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CT45A6P0DMU7 189 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CT45A5P0DMU8 189 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CT45A7P0DMV0 189 aa12.6□□□□□ -0.39
RET-201ENST00000340058 RPS2P15880 293 aaKnown RBP12.6□□□□□ -0.39
RET-201ENST00000340058 CHRNA7P36544 502 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
RET-201ENST00000340058 ZIC4Q8N9L1 334 aa12.6□□□□□ -0.39
RET-201ENST00000340058 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
RET-201ENST00000340058 LYZL4Q96KX0 146 aa12.6□□□□□ -0.39
RET-201ENST00000340058 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
RET-201ENST00000340058 ZNF835Q9Y2P0 537 aa12.6□□□□□ -0.39
RET-201ENST00000340058 HRASP01112 189 aa12.6□□□□□ -0.39
RET-201ENST00000340058 Q0VFX4 171 aa12.6□□□□□ -0.39
RET-201ENST00000340058 MYOZ1Q9NP98 299 aaPredicted RBP12.6□□□□□ -0.39
RET-201ENST00000340058 HIF1ANQ9NWT6 349 aa12.6□□□□□ -0.39
RET-201ENST00000340058 KIAA1456Q9P272 454 aa12.6□□□□□ -0.39
RET-201ENST00000340058 hCG_38984A0A1B0GV85 526 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CD82P27701 267 aa12.6□□□□□ -0.39
RET-201ENST00000340058 CHRNB4P30926 498 aa12.6□□□□□ -0.39
RET-201ENST00000340058 SSTR5P35346 364 aa12.6□□□□□ -0.39
RET-201ENST00000340058 NTNG2Q96CW9 530 aa12.6□□□□□ -0.39
RET-201ENST00000340058 SCGB1D1O95968 90 aa12.59□□□□□ -0.39
RET-201ENST00000340058 CYB5R3P00387 301 aaPredicted RBP12.59□□□□□ -0.39
RET-201ENST00000340058 GZMHP20718 246 aa12.59□□□□□ -0.39
RET-201ENST00000340058 DVL1P1P54792 670 aaPredicted RBP12.59□□□□□ -0.39
RET-201ENST00000340058 PAQR4Q8N4S7 273 aaPredicted RBP12.59□□□□□ -0.39
RET-201ENST00000340058 TMEM252Q8N6L7 170 aa12.59□□□□□ -0.39
RET-201ENST00000340058 OR10G4Q8NGN3 311 aa12.59□□□□□ -0.39
RET-201ENST00000340058 OR10G9Q8NGN4 311 aa12.59□□□□□ -0.39
RET-201ENST00000340058 OR10G7Q8NGN6 311 aa12.59□□□□□ -0.39
RET-201ENST00000340058 OR4A4PQ8NGN8 299 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms