RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TLN1Q9Y490 2541 aaKnown RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 BSNQ9UPA5 3926 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 PRR14LQ5THK1 2151 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 MEX3AA1L020 520 aaKnown RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 K7N7A8 449 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 SNRNP70P08621 437 aaKnown RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 RUNX1Q01196 453 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 ID3Q02535 119 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 ZNF154Q13106 437 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 H1FOOQ8IZA3 346 aaPredicted RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 Q8NA96 180 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 CLCC1Q96S66 551 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 RTL8AQ9BWD3 113 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 SLC25A31Q9H0C2 315 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 CDIPTO14735 213 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 SMPD2O60906 423 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 OR2H2O95918 312 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 ZNF14P17017 642 aaPredicted RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 RAB5CP51148 216 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 PPP1CBP62140 327 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 ZNF880Q6PDB4 577 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 RNASE11Q8TAA1 199 aaKnown RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 GTF3AQ92664 365 aaKnown RBP13.8□□□□□ -0.2
LITAF-201ENST00000339430 CLCF1Q9UBD9 225 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 PPP1R3CQ9UQK1 317 aa13.8□□□□□ -0.2
LITAF-201ENST00000339430 CLEC18AA5D8T8 446 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 M0R036 132 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 HEXAP06865 529 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 GRPP07492 148 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 DAOP14920 347 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 IGHV1-2P23083 117 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 UCP2P55851 309 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 HOXA4Q00056 320 aaPredicted RBP13.79□□□□□ -0.2
LITAF-201ENST00000339430 AWAT1Q58HT5 328 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 CISD2Q8N5K1 135 aaKnown RBP13.79□□□□□ -0.2
LITAF-201ENST00000339430 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 GPR146Q96CH1 333 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 C14orf79Q96F83 325 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 RARRES2Q99969 163 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 TRAPPC2LQ9UL33 140 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 TRBV6-6A0A0A6YYG2 114 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 DUXBA0A1W2PPF3 345 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 H0YL77 283 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 HSPA12AO43301 675 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 SERPINE2P07093 398 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 ZNF16P17020 682 aaPredicted RBP13.79□□□□□ -0.2
LITAF-201ENST00000339430 CEBPDP49716 269 aaPredicted RBP13.79□□□□□ -0.2
LITAF-201ENST00000339430 RAB13P51153 203 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 AKR1D1P51857 326 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 UBE2NP61088 152 aaKnown RBP13.79□□□□□ -0.2
LITAF-201ENST00000339430 CCL20P78556 96 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 AVPI1Q5T686 147 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 COMMD1Q8N668 190 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 OR10V1Q8NGI7 309 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 SLC25A40Q8TBP6 338 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 CDH20Q9HBT6 801 aa13.79□□□□□ -0.2
LITAF-201ENST00000339430 RBM7Q9Y580 266 aaKnown RBP13.79□□□□□ -0.2
LITAF-201ENST00000339430 COLCA2A8K830 154 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 NDUFA2O43678 99 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 S100GP29377 79 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 RPL35P42766 123 aaKnown RBP13.78□□□□□ -0.2
LITAF-201ENST00000339430 PAX9P55771 341 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 CABLES2Q9BTV7 478 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 ESRP2Q9H6T0 727 aaKnown RBP13.78□□□□□ -0.2
LITAF-201ENST00000339430 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 KCNS2Q9ULS6 477 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 UMAD1C9J7I0 102 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 NXPH2O95156 264 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 TMEM267Q0VDI3 215 aaPredicted RBP13.78□□□□□ -0.2
LITAF-201ENST00000339430 Q6ZRM9 215 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 CXorf67Q86X51 503 aaPredicted RBP13.78□□□□□ -0.2
LITAF-201ENST00000339430 OR1J1Q8NGS3 322 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 CD300LFQ8TDQ1 290 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 OR14J1Q9UGF5 321 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
LITAF-201ENST00000339430 LRP5LA4QPB2 252 aa13.77□□□□□ -0.21
LITAF-201ENST00000339430 IGLV2-14P01704 120 aa13.77□□□□□ -0.21
LITAF-201ENST00000339430 LMO1P25800 156 aa13.77□□□□□ -0.21
LITAF-201ENST00000339430 TESK1Q15569 626 aa13.77□□□□□ -0.21
LITAF-201ENST00000339430 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
LITAF-201ENST00000339430 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
LITAF-201ENST00000339430 C7orf77A4D0Y5 90 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 AHRRA9YTQ3 701 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 AGFG2O95081 481 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 MRPL49Q13405 166 aaKnown RBP13.76□□□□□ -0.21
LITAF-201ENST00000339430 HMGN3Q15651 99 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 ACSF3Q4G176 576 aaPredicted RBP13.76□□□□□ -0.21
LITAF-201ENST00000339430 KRTCAP3Q53RY4 240 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 ZNF497Q6ZNH5 498 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 CNEP1R1Q8N9A8 125 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 ABHD14BQ96IU4 210 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 PBDC1Q9BVG4 233 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 BCL2L14Q9BZR8 327 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 WDR1O75083 606 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 PSG7Q13046 419 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 IFT22Q9H7X7 185 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms