RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 C12orf77C9JDV5 145 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 RAMP3O60896 148 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 LALBAP00709 142 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 HBZP02008 142 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 GLAP06280 429 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 MGMTP16455 207 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 FUT3P21217 361 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 CDX1P47902 265 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-202ENST00000337571 FOXE3Q13461 319 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 DOC2BQ14184 412 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 TMEM65Q6PI78 240 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 ETV3LQ6ZN32 361 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 LCNL1Q6ZST4 164 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 SLC25A48Q6ZT89 311 aaKnown RBP8.39□□□□□ -1.07
CAPN3-202ENST00000337571 C18orf65Q6ZTR6 163 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 Q8N9W7 124 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 OR10V1Q8NGI7 309 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 OR8U1Q8NH10 309 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 NRG4Q8WWG1 115 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 THRSPQ92748 146 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 ST6GALNAC6Q969X2 333 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 OR14A2Q96R54 314 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 BANF2Q9H503 90 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 OR2S2Q9NQN1 319 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 LRRC42Q9Y546 428 aa8.39□□□□□ -1.07
CAPN3-202ENST00000337571 UBE2QL1A1L167 161 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 MYL12BO14950 172 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
CAPN3-202ENST00000337571 ELANEP08246 267 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 OR5H8P0DN80 308 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 CELP19835 753 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 FSTP19883 344 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 MAPK3P27361 379 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-202ENST00000337571 RPS11P62280 158 aaKnown RBP eCLIP8.38□□□□□ -1.07
CAPN3-202ENST00000337571 KIR2DS1Q14954 304 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 CT45A1Q5HYN5 189 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-202ENST00000337571 Q8N6K4 173 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 PACRGLQ8N7B6 248 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 NKAIN3Q8N8D7 197 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 TMEM104Q8NE00 496 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 OR5M8Q8NGP6 311 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 CT45A3Q8NHU0 189 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 TFAP2CQ92754 450 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 GGHQ92820 318 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 DUX3Q96PT4 197 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 P2RX4Q99571 388 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 CST11Q9H112 138 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 TAF9BQ9HBM6 251 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 PLSCR3Q9NRY6 295 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 RCC2Q9P258 522 aaKnown RBP8.38□□□□□ -1.07
CAPN3-202ENST00000337571 GHRLQ9UBU3 117 aa8.38□□□□□ -1.07
CAPN3-202ENST00000337571 TRBV5-7A0A0A0MS05 114 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 MAGEA13PA6NCF6 341 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF736B4DX44 427 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-202ENST00000337571 SLC31A2O15432 143 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 LANCL1O43813 399 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 RGS11O94810 467 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 RCC1P18754 421 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF134P52741 427 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF137PP52743 207 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 F2RL1P55085 397 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 TNP2Q05952 138 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 RCN1Q15293 331 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 MORN2Q502X0 79 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 C9orf66Q5T8R8 295 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 C8orf59Q8N0T1 100 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF439Q8NDP4 499 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 GALMQ96C23 342 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 PGLYRP3Q96LB9 341 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 DERL3Q96Q80 235 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 CHCHD6Q9BRQ6 235 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 UQCC2Q9BRT2 126 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 CNOT2Q9NZN8 540 aaKnown RBP8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ABRACLQ9P1F3 81 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF107Q9UII5 783 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-202ENST00000337571 ERGIC3Q9Y282 383 aa8.37□□□□□ -1.07
CAPN3-202ENST00000337571 SC5DO75845 299 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 IGHG4P01861 327 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 CD1AP06126 327 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 UBBP0CG47 229 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 VHLP40337 213 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 WNT4P56705 351 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 MMDQ15546 238 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 DEFB136Q30KP8 78 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 AHSA2Q719I0 299 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF554Q86TJ5 538 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 GAPTQ8N292 157 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 FAM71E2Q8N5Q1 922 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF485Q8NCK3 441 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 OR52L2PQ8NGH6 319 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 FAM46BQ96A09 425 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 NEDD4LQ96PU5 975 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 ZNF251Q9BRH9 671 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 ABHD14AQ9BUJ0 271 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 STEAP1Q9UHE8 339 aa8.36□□□□□ -1.07
CAPN3-202ENST00000337571 JPT1Q9UK76 154 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms