RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 A0A087WWC5 75 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 TRBV5-7A0A0A0MS05 114 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 TRGV5A0A0B4J1U4 118 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 C3orf85A0A1B0GTC6 90 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 CSRP2Q16527 193 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 LDLRAD2Q5SZI1 272 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 BMPERQ8N8U9 685 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 A0A1W2PP11 408 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 BGLAPP02818 100 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 POU2F2P09086 479 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 ZNF735P0CB33 412 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 BCL2P10415 239 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 KLF3P57682 345 aaPredicted RBP14□□□□□ -0.17
NPHP3-201ENST00000337331 RAC3P60763 192 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 ZXDAP98168 799 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 PECRQ9BY49 303 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 CLCF1Q9UBD9 225 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 UQCR10Q9UDW1 63 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 NAT8BQ9UHF3 227 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 WASHC3Q9Y3C0 194 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 WIPI2Q9Y4P8 454 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 LGALS4P56470 323 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 RNF133Q8WVZ7 376 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 SLC25A22Q9H936 323 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 SIPA1L1O43166 1804 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 C5orf67F2Z3F1 127 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 M0R1B8 84 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 SRD5A2P31213 254 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 OR6C3Q9NZP0 311 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 WNT16Q9UBV4 365 aa14□□□□□ -0.17
NPHP3-201ENST00000337331 PRRG2O14669 202 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 TEX38Q6PEX7 206 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 DHRS13Q6UX07 377 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 C9orf40Q8IXQ3 194 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 OR2D3Q8NGH3 330 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 CDC34P49427 236 aaPredicted RBP13.99□□□□□ -0.17
NPHP3-201ENST00000337331 RIPPLY2Q5TAB7 128 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 D2HGDHQ8N465 521 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 DEFB123Q8N688 67 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 ADAT3Q96EY9 351 aaPredicted RBP13.99□□□□□ -0.17
NPHP3-201ENST00000337331 TIMP4Q99727 224 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 ZPBPQ9BS86 351 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 CACNG5Q9UF02 275 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 TMEM30CPA0ZSE6 113 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 TAS2R45P59539 299 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 OR10V1Q8NGI7 309 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 AQP3Q92482 292 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 FSCN3Q9NQT6 498 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 PILRAQ9UKJ1 303 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 LMX1BO60663 402 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 CA11O75493 328 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 HRASP01112 189 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 CTSDP07339 412 aaPredicted RBP13.99□□□□□ -0.17
NPHP3-201ENST00000337331 CEACAM6P40199 344 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 ATOH7Q8N100 152 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 OR10X1Q8NGY0 326 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 LPAR5Q9H1C0 372 aa13.99□□□□□ -0.17
NPHP3-201ENST00000337331 M0R1X1 148 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 CIDEAO60543 219 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 WFDC8Q8IUA0 241 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 FGF11Q92914 225 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 RAB40CQ96S21 281 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 CD99P14209 185 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 IL24Q13007 206 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 ALKBH6Q3KRA9 238 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 ZFP30Q9Y2G7 519 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 ATP23Q9Y6H3 246 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 MDC1Q14676 2089 aaKnown RBP13.98□□□□□ -0.17
NPHP3-201ENST00000337331 C4orf51C9J302 202 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 CRYABP02511 175 aaKnown RBP13.98□□□□□ -0.17
NPHP3-201ENST00000337331 DMWDQ09019 674 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 RTL8BQ17RB0 113 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 GAB4Q2WGN9 574 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 DEFB109BQ30KR1 87 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 C1orf194Q5T5A4 169 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 ZCCHC14Q8WYQ9 949 aaKnown RBP13.98□□□□□ -0.17
NPHP3-201ENST00000337331 TM4SF19Q96DZ7 209 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 UCN2Q96RP3 112 aa13.98□□□□□ -0.17
NPHP3-201ENST00000337331 CHST1O43916 411 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 ZNF253O75346 499 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 NGFRP08138 427 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 CCL4P13236 92 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 AARDQ4LEZ3 155 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 SLC24A4Q8NFF2 622 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 OR5B3Q8NH48 314 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 BCL2L2Q92843 193 aaPredicted RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 IL19Q9UHD0 177 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 DENND4AQ7Z401 1863 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 TDRD15B5MCY1 1934 aaKnown RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 NKX2-6A6NCS4 301 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 MELTFP08582 738 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 ERHP84090 104 aaKnown RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 CHD3Q12873 2000 aaKnown RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 RTP5Q14D33 572 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 NUFIP2Q7Z417 695 aaKnown RBP13.97□□□□□ -0.17
NPHP3-201ENST00000337331 OR4B1Q8NGF8 309 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 SGMS2Q8NHU3 365 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 TAAR6Q96RI8 345 aa13.97□□□□□ -0.17
NPHP3-201ENST00000337331 RSPO3Q9BXY4 272 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms