RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
LIMS1-201ENST00000332345 MXD1Q05195 221 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 Q6ZSV7 163 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 MOB1BQ7L9L4 216 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 OR10R2Q8NGX6 335 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 YIPF6Q96EC8 236 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
LIMS1-201ENST00000332345 CENPOQ9BU64 300 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 ATG5Q9H1Y0 275 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 RNF167Q9H6Y7 350 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
LIMS1-201ENST00000332345 A0A0B4J203 849 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 TMEM127O75204 238 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 GAPDHP04406 335 aaKnown RBP11.27□□□□□ -0.61
LIMS1-201ENST00000332345 FAM106CPP0CH98 169 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 KIR2DS4P43632 304 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 PLA2G7Q13093 441 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 ARL6IP1Q15041 203 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 MORN2Q502X0 79 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 SHISA2Q6UWI4 295 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 CCBE1Q6UXH8 406 aaPredicted RBP11.27□□□□□ -0.61
LIMS1-201ENST00000332345 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 OR8H3Q8N146 312 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 OR4C13Q8NGP0 309 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 RANBP3Q9H6Z4 567 aaPredicted RBP11.27□□□□□ -0.61
LIMS1-201ENST00000332345 C12orf4Q9NQ89 552 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 JPT1Q9UK76 154 aa11.27□□□□□ -0.61
LIMS1-201ENST00000332345 TENM1Q9UKZ4 2725 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 YPEL1O60688 119 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 SCGNO76038 276 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 LPLP06858 475 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 CD3GP09693 182 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 CLEC2LP0C7M8 214 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 HMGN3Q15651 99 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 LY6G6FQ5SQ64 297 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 SLC25A48Q6ZT89 311 aaKnown RBP11.26□□□□□ -0.61
LIMS1-201ENST00000332345 C16orf82Q7Z2V1 217 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 TMEM219Q86XT9 240 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 THNSL2Q86YJ6 484 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 OR10V1Q8NGI7 309 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 CAPSLQ8WWF8 208 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 IL1F10Q8WWZ1 152 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 YPEL2Q96QA6 119 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 ANK2Q01484 3957 aa11.26□□□□□ -0.61
LIMS1-201ENST00000332345 SERPINE3A8MV23 424 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 RAB27BO00194 218 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 GNB3P16520 340 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 CD24P25063 80 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 ZNF134P52741 427 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 SCAND1P57086 179 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 ZNF816Q0VGE8 651 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-201ENST00000332345 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 CT45A1Q5HYN5 189 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 C11orf88Q6PI97 169 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 CT45A3Q8NHU0 189 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 PHF21AQ96BD5 680 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 HDHD3Q9BSH5 251 aaPredicted RBP11.25□□□□□ -0.61
LIMS1-201ENST00000332345 Q9N2K0 584 aa11.25□□□□□ -0.61
LIMS1-201ENST00000332345 A0A075B6Q4 140 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 HSD17B6O14756 317 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 TIMM23O14925 209 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 CHST1O43916 411 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 ZBTB25P24278 435 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 PPP1CCP36873 323 aaKnown RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 TALDO1P37837 337 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 FAM53AQ6NSI3 398 aaPredicted RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 MOB3BQ86TA1 216 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 ZNF439Q8NDP4 499 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 OR13F1Q8NGS4 319 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 RBM14Q96PK6 669 aaKnown RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 FUNDC2Q9BWH2 189 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 MRPS26Q9BYN8 205 aaKnown RBP11.24□□□□□ -0.61
LIMS1-201ENST00000332345 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 KCNK7Q9Y2U2 307 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 ETV7Q9Y603 341 aa11.24□□□□□ -0.61
LIMS1-201ENST00000332345 A0A1W2PPI3 338 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 MFNGO00587 321 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 SLC31A2O15432 143 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 HSPA12AO43301 675 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 TXNL1O43396 289 aa11.23□□□□□ -0.61
LIMS1-201ENST00000332345 OR2F2O95006 317 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms