RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PDCD6O75340 191 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 RPL7L1Q6DKI1 246 aaKnown RBP13.47□□□□□ -0.25
PDGFB-201ENST00000331163 OR11L1Q8NGX0 322 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 ZNF251Q9BRH9 671 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 SMCO4Q9NRQ5 59 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 UTP20O75691 2785 aaKnown RBP13.47□□□□□ -0.25
PDGFB-201ENST00000331163 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 PQLC2LA1A4F0 135 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 DIRAS3O95661 229 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 SFTPCP11686 197 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 CA7P43166 264 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 OR5AC2Q9NZP5 309 aa13.47□□□□□ -0.25
PDGFB-201ENST00000331163 CD1AP06126 327 aa13.46□□□□□ -0.25
PDGFB-201ENST00000331163 PRF1P14222 555 aa13.46□□□□□ -0.25
PDGFB-201ENST00000331163 RPUSD3Q6P087 351 aaKnown RBP13.46□□□□□ -0.25
PDGFB-201ENST00000331163 OR5P3Q8WZ94 311 aa13.46□□□□□ -0.25
PDGFB-201ENST00000331163 HINT2Q9BX68 163 aa13.46□□□□□ -0.25
PDGFB-201ENST00000331163 EGLN1Q9GZT9 426 aa13.46□□□□□ -0.25
PDGFB-201ENST00000331163 UBE2J1Q9Y385 318 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-201ENST00000331163 DHRS7CA6NNS2 312 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 PRH1P02810 166 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 OR3A1P47881 315 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 GNG10P50151 68 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 RBM11P57052 281 aaKnown RBP13.46□□□□□ -0.26
PDGFB-201ENST00000331163 HIST1H3AP68431 136 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 SPRNQ5BIV9 151 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 HIST2H3PS2Q5TEC6 136 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 HIST2H3AQ71DI3 136 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 MARS2Q96GW9 593 aaKnown RBP13.46□□□□□ -0.26
PDGFB-201ENST00000331163 CXXC4Q9H2H0 198 aa13.46□□□□□ -0.26
PDGFB-201ENST00000331163 OR5B21A6NL26 309 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 J3QT63 122 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 SCTP09683 121 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 FBXW12Q6X9E4 464 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 SUMF2Q8NBJ7 301 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 IGKV1D-8A0A087WSZ0 117 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 LPAR6P43657 344 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 MECP2P51608 486 aaKnown RBP13.45□□□□□ -0.26
PDGFB-201ENST00000331163 FOXL2NBQ6ZUU3 175 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 FAM185AQ8N0U4 392 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 TMEM229BQ8NBD8 167 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 PRRT1Q99946 306 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 TMEM14DPA8MWL7 114 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 C9JQL5 133 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 MLNRO43193 412 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 ADAM20O43506 726 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 CRHP06850 196 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 Q6ZRG5 221 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 MUC15Q8N387 334 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 PHYHIPLQ96FC7 376 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 MMP26Q9NRE1 261 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 URGCP-MRPS24S4R325 110 aa13.45□□□□□ -0.26
PDGFB-201ENST00000331163 DOCK11Q5JSL3 2073 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 YIF1AO95070 293 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 OR2H2O95918 312 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 HAND1O96004 215 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 CD8AP01732 235 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 CCKARP32238 428 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 ZNF260Q3ZCT1 412 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 SPACA1Q9HBV2 294 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 LSM5Q9Y4Y9 91 aaKnown RBP13.44□□□□□ -0.26
PDGFB-201ENST00000331163 OR13C7P0DN81 318 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 CEACAM8P31997 349 aaPredicted RBP13.44□□□□□ -0.26
PDGFB-201ENST00000331163 ERVFRD-1P60508 538 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 SMIM21Q3B7S5 101 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 RHOVQ96L33 236 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 SEC11CQ9BY50 192 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 H0YIZ8 118 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 ZBTB25P24278 435 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
PDGFB-201ENST00000331163 ZNF133P52736 654 aaPredicted RBP13.44□□□□□ -0.26
PDGFB-201ENST00000331163 RAB32Q13637 225 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 ZNF345Q14585 488 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 TAF9BQ9HBM6 251 aa13.44□□□□□ -0.26
PDGFB-201ENST00000331163 RCC2Q9P258 522 aaKnown RBP13.44□□□□□ -0.26
PDGFB-201ENST00000331163 PUS1Q9Y606 427 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDGFB-201ENST00000331163 SCGNO76038 276 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 CGAP01215 116 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 IGKV3-15P01624 115 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 COX5BP10606 129 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 GLRXP35754 106 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 COL10A1Q03692 680 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 MSMPQ1L6U9 139 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 FAM53AQ6NSI3 398 aaPredicted RBP13.43□□□□□ -0.26
PDGFB-201ENST00000331163 DHRS11Q6UWP2 260 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 SSX9Q7RTT3 188 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 TCTEX1D2Q8WW35 142 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 FBXO7Q9Y3I1 522 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 RNF115Q9Y4L5 304 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 A0A1W2PPE2 198 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 COLCA2A8K830 154 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 TSPAN15O95858 294 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 COX5AP20674 150 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 GLIPR1P48060 266 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 HIST1H2BAQ96A08 127 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 LPAR3Q9UBY5 353 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 MMP24Q9Y5R2 645 aa13.43□□□□□ -0.26
PDGFB-201ENST00000331163 LRRC30A6NM36 301 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms