RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 OR52L2PQ8NGH6 319 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 MOB3AQ96BX8 217 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 NUDT15Q9NV35 164 aa8.44□□□□□ -1.06
VIPAS39-201ENST00000327028 NBPF19A0A087WUL8 3843 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 PPIAL4CA0A0B4J2A2 164 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 PPIAL4GP0DN37 164 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 LOXL3P58215 753 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 SURF2Q15527 256 aaPredicted RBP8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 PRAMEF5Q5TYX0 476 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 PRSS57Q6UWY2 283 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 HEPN1Q6WQI6 88 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 ZDHHC22Q8N966 263 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 OR52M1Q8NGK5 317 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 MARVELD1Q9BSK0 173 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 RDH8Q9NYR8 311 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 OR2W1Q9Y3N9 320 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 FAM172BPA6NC97 362 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 C17orf98A8MV24 154 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 RBP4P02753 201 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 LIPFP07098 398 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 ZFP36P26651 326 aaKnown RBP8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 PPP1CCP36873 323 aaKnown RBP8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 CEACAM6P40199 344 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 Q6ZNX1 250 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 MARCH1Q8TCQ1 289 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 DMRTB1Q96MA1 342 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 OR2S2Q9NQN1 319 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 GFOD1Q9NXC2 390 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 GNG12Q9UBI6 72 aa8.43□□□□□ -1.06
VIPAS39-201ENST00000327028 TRAV6A0A075B6T7 132 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 IGHV3-43A0A0B4J1X8 118 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 ARPC1BO15143 372 aaKnown RBP8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 FOXH1O75593 365 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 IGHV3-43DP0DP04 118 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 OMGP23515 440 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 RAG2P55895 527 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 UCP3P55916 312 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 FXYD4P59646 89 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 LTC4SQ16873 150 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 KRTAP1-3Q8IUG1 177 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 FAM216AQ8WUB2 273 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 SCGB3A2Q96PL1 93 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 VSIG4Q9Y279 399 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 ABCA2Q9BZC7 2435 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 ITPR2Q14571 2701 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 A0A096LNT2 108 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 INMT-MINDY4F8WBC2 141 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 ENSAO43768 121 aaKnown RBP8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 YPEL1O60688 119 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 RGS11O94810 467 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 PGAM2P15259 253 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 USF1P22415 310 aaPredicted RBP8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 LY6G6FQ5SQ64 297 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 KIR3DL3Q8N743 410 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 OR10V1Q8NGI7 309 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 DACT3Q96B18 629 aaPredicted RBP8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 YPEL2Q96QA6 119 aa8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
VIPAS39-201ENST00000327028 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 FAM157AC9JC47 383 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 MMP23AO75900 390 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 RLN1P04808 185 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 MECP2P51608 486 aaKnown RBP8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 LUMP51884 338 aaPredicted RBP8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 LCN2P80188 198 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 PAX2Q02962 417 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 FAM53AQ6NSI3 398 aaPredicted RBP8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 SLC38A6Q8IZM9 456 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 TOMM40LQ969M1 308 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 GPR132Q9UNW8 380 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 IGKV1D-13A0A0B4J2D9 117 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 M0R1W7 72 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 ITGB1BP1O14713 200 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 PEX14O75381 377 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 CTSDP07339 412 aaPredicted RBP8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 IGKV1-13P0DP09 117 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 NFYBP25208 207 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 Q3ZCU0 254 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 MORN2Q502X0 79 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 C11orf42Q8N5U0 333 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 ZFAND1Q8TCF1 268 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 EDARADDQ8WWZ3 215 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 C1orf159Q96HA4 380 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 RSRP1Q9BUV0 290 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 ONECUT1Q9UBC0 465 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 SESN1Q9Y6P5 492 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 PDZD2O15018 2839 aa8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 YLPM1P49750 1951 aaKnown RBP8.41□□□□□ -1.06
VIPAS39-201ENST00000327028 hCG_1809904A0A1W2PP81 198 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 A0A1W2PPE2 198 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 A0A1W2PR64 198 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 A0A1W2PRV1 198 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 IGHV1-8P0DP01 117 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 BAMBIQ13145 260 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 LPCAT3Q6P1A2 487 aa8.4□□□□□ -1.06
VIPAS39-201ENST00000327028 LDLRAD3Q86YD5 345 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms