RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 C6orf141Q5SZD1 244 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 C6orf183Q5T699 404 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 OR10K2Q6IF99 312 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 ODF3L1Q8IXM7 274 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 C10orf67Q8IYJ2 551 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 DHRSXQ8N5I4 330 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 COMMD1Q8N668 190 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 NKAIN3Q8N8D7 197 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 OR52L2PQ8NGH6 319 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 ABHD14AQ9BUJ0 271 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 TAF9BQ9HBM6 251 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 SPACA1Q9HBV2 294 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 PSORS1C1Q9UIG5 152 aa9.67□□□□□ -0.86
TPM3-204ENST00000323144 EFCAB10A6NFE3 127 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 CCL24O00175 119 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 PDCD6O75340 191 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 CAPGP40121 348 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 GP2P55259 537 aaKnown RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 NDPQ00604 133 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 CD69Q07108 199 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 FOXE3Q13461 319 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 MED21Q13503 144 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 GPR176Q14439 515 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 MMDQ15546 238 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 TMEM30BQ3MIR4 351 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 Q3ZCU0 254 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 CXorf66Q5JRM2 361 aaPredicted RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 VAX1Q5SQQ9 334 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 TTC23Q5W5X9 447 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 TEX38Q6PEX7 206 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 C8orf59Q8N0T1 100 aaPredicted RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 PACRGLQ8N7B6 248 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 RNF152Q8N8N0 203 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 FBLIM1Q8WUP2 373 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 PRR25Q96S07 402 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 RASL11BQ9BPW5 248 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 SULT4A1Q9BR01 284 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 GPR61Q9BZJ8 451 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 DCLRE1BQ9H816 532 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 ZFP57Q9NU63 452 aa9.66□□□□□ -0.86
TPM3-204ENST00000323144 MBNL3Q9NUK0 354 aaKnown RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 CHCHD3Q9NX63 227 aaKnown RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 CNOT2Q9NZN8 540 aaKnown RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 ZNF107Q9UII5 783 aaPredicted RBP9.66□□□□□ -0.86
TPM3-204ENST00000323144 SAA2-SAA4A0A096LPE2 208 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 FAM90A10PA6NDY2 464 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 FAM90A7PA6NKC0 464 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 FAM90A23PA8MXZ1 464 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 ATP6V0E1O15342 81 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 LANCL1O43813 399 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 SAA2P0DJI9 122 aaPredicted RBP9.65□□□□□ -0.86
TPM3-204ENST00000323144 CHATP28329 748 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 SLC6A1P30531 599 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 OR3A3P47888 321 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 FHL3Q13643 280 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 ASPHD1Q5U4P2 390 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 TRAT1Q6PIZ9 186 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 BPIFB6Q8NFQ5 453 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 OR8U1Q8NH10 309 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 MRPS24Q96EL2 167 aaKnown RBP9.65□□□□□ -0.86
TPM3-204ENST00000323144 RITA1Q96K30 269 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 KCTD7Q96MP8 289 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 B9D2Q9BPU9 175 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 NICN1Q9BSH3 213 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 PARP12Q9H0J9 701 aaKnown RBP9.65□□□□□ -0.86
TPM3-204ENST00000323144 IFI27L2Q9H2X8 130 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 GNB4Q9HAV0 340 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 FKBP14Q9NWM8 211 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 JPT1Q9UK76 154 aa9.65□□□□□ -0.86
TPM3-204ENST00000323144 RYR3Q15413 4870 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 A0A0A6YYD4 124 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 G3V318 75 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
TPM3-204ENST00000323144 IGHG4P01861 327 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 FUT3P21217 361 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 VDAC1P21796 283 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 PSMB8P28062 276 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 SOX6P35712 828 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 GABPB1Q06547 395 aaPredicted RBP9.64□□□□□ -0.87
TPM3-204ENST00000323144 UNC119Q13432 240 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 HMGN3Q15651 99 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 PNLIPRP3Q17RR3 467 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 MORN2Q502X0 79 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 RBM48Q5RL73 367 aaKnown RBP9.64□□□□□ -0.87
TPM3-204ENST00000323144 OGFRL1Q5TC84 451 aaPredicted RBP9.64□□□□□ -0.87
TPM3-204ENST00000323144 LRRTM1Q86UE6 522 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 SVOPQ8N4V2 548 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 MYOZ3Q8TDC0 251 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 C4orf3Q8WVX3 66 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 NABP2Q9BQ15 211 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 MCRIP2Q9BUT9 160 aaKnown RBP9.64□□□□□ -0.87
TPM3-204ENST00000323144 TMED9Q9BVK6 235 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 OR2S2Q9NQN1 319 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 PARP11Q9NR21 331 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 FBXO7Q9Y3I1 522 aa9.64□□□□□ -0.87
TPM3-204ENST00000323144 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 ST8SIA5O15466 376 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 ELANEP08246 267 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 VSIG8P0DPA2 414 aa9.63□□□□□ -0.87
TPM3-204ENST00000323144 SNRPBP14678 240 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms