RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 SCTP09683 121 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
HNF4A-202ENST00000316673 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
HNF4A-202ENST00000316673 HOXA4Q00056 320 aaPredicted RBP12.78□□□□□ -0.36
HNF4A-202ENST00000316673 MEF2CQ06413 473 aaPredicted RBP12.78□□□□□ -0.36
HNF4A-202ENST00000316673 TMEM128Q5BJH2 165 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 FAM185AQ8N0U4 392 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 ZNRF1Q8ND25 227 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 IL1F10Q8WWZ1 152 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 MOB3AQ96BX8 217 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 COQ2Q96H96 371 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 CCL13Q99616 98 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
HNF4A-202ENST00000316673 SLC25A10Q9UBX3 287 aaPredicted RBP12.78□□□□□ -0.36
HNF4A-202ENST00000316673 ZNF69Q9UC07 566 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 MAB21L2Q9Y586 359 aa12.78□□□□□ -0.36
HNF4A-202ENST00000316673 DOCK11Q5JSL3 2073 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 TRBV6-7A0A0A0MS04 114 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 A8MXK9 166 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 RGS11O94810 467 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 CTSDP07339 412 aaPredicted RBP12.77□□□□□ -0.37
HNF4A-202ENST00000316673 OR4E1P0C645 316 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 ANXA3P12429 323 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 CD99P14209 185 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 ANXA7P20073 488 aaKnown RBP12.77□□□□□ -0.37
HNF4A-202ENST00000316673 GNB2P62879 340 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 AADACL3Q5VUY0 350 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 ZNF626Q68DY1 528 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 LYPD2Q6UXB3 125 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 LINC01356Q8N9X3 169 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 GHITMQ9H3K2 345 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 KCNIP3Q9Y2W7 256 aa12.77□□□□□ -0.37
HNF4A-202ENST00000316673 MED13LQ71F56 2210 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 AKAP9Q99996 3911 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 A0A1W2PPH5 198 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 OR5H14A6NHG9 310 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 CCNKO75909 580 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 SLC22A5O76082 557 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 NDUFB7P17568 137 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 GLIPR1P48060 266 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 HTD2P86397 168 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 CR1LQ2VPA4 569 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 IGSF11Q5DX21 431 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
HNF4A-202ENST00000316673 CYB5R2Q6BCY4 276 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 SGPP2Q8IWX5 399 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 ZNF431Q8TF32 576 aaPredicted RBP12.76□□□□□ -0.37
HNF4A-202ENST00000316673 ARL11Q969Q4 196 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 GAL3ST2Q9H3Q3 398 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 VSIG4Q9Y279 399 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 POLR3KQ9Y2Y1 108 aaPredicted RBP12.76□□□□□ -0.37
HNF4A-202ENST00000316673 UBE2J1Q9Y385 318 aaPredicted RBP12.76□□□□□ -0.37
HNF4A-202ENST00000316673 OR2W1Q9Y3N9 320 aa12.76□□□□□ -0.37
HNF4A-202ENST00000316673 RBM7Q9Y580 266 aaKnown RBP12.76□□□□□ -0.37
HNF4A-202ENST00000316673 MALRD1Q5VYJ5 2156 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 VPS13CQ709C8 3753 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 CR1P17927 2039 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.75□□□□□ -0.372e-8■■■□□ 14.7
HNF4A-202ENST00000316673 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 DVL1O14640 695 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
HNF4A-202ENST00000316673 HLA-AP01891 365 aaKnown RBP12.75□□□□□ -0.37
HNF4A-202ENST00000316673 AKR1C4P17516 323 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 FXYD4P59646 89 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
HNF4A-202ENST00000316673 ZNF841Q6ZN19 808 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 LYG2Q86SG7 212 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 CIARTQ8N365 385 aaPredicted RBP12.75□□□□□ -0.37
HNF4A-202ENST00000316673 FAM216BQ8N7L0 139 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 MRGPRDQ8TDS7 321 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 EDARADDQ8WWZ3 215 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 DMRTB1Q96MA1 342 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 PHB2Q99623 299 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 BEX2Q9BXY8 128 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 BEX1Q9HBH7 125 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 TAS2R3Q9NYW6 316 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 CTSZQ9UBR2 303 aa12.75□□□□□ -0.37
HNF4A-202ENST00000316673 ACANP16112 2415 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 F8P00451 2351 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 TRBV23-1A0A0A0MS06 115 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 A0A0B4J293 547 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 ZNF729A6NN14 1252 aaPredicted RBP12.74□□□□□ -0.37
HNF4A-202ENST00000316673 C12orf77C9JDV5 145 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 TUSC2O75896 110 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 HBZP02008 142 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 MSMBP08118 114 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 AADACP22760 399 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 NFYAP23511 347 aaPredicted RBP12.74□□□□□ -0.37
HNF4A-202ENST00000316673 VAMP1P23763 118 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 GATA3P23771 443 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 LUMP51884 338 aaPredicted RBP12.74□□□□□ -0.37
HNF4A-202ENST00000316673 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
HNF4A-202ENST00000316673 H1FOOQ8IZA3 346 aaPredicted RBP12.74□□□□□ -0.37
HNF4A-202ENST00000316673 MAPK1IP1LQ8NDC0 245 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms