RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 OR1A1Q9P1Q5 309 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 ZNF391Q9UJN7 358 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 GAB2Q9UQC2 676 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 ANKRD11Q6UB99 2663 aaPredicted RBP12.72□□□□□ -0.37
TFE3-201ENST00000315869 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 CLDN1O95832 211 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 HOXA5P20719 270 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 CA6P23280 308 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 TMEM56Q96MV1 263 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 IL17BQ9UHF5 180 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 TMEM56-RWDD3S4R434 201 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 GTF3C1Q12789 2109 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
TFE3-201ENST00000315869 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
TFE3-201ENST00000315869 SYNGR4O95473 234 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 CDX1P47902 265 aaPredicted RBP12.72□□□□□ -0.37
TFE3-201ENST00000315869 UCP2P55851 309 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 FGF12P61328 243 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 PLGLB1Q02325 96 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 IL24Q13007 206 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 C6orf15Q6UXA7 325 aaPredicted RBP12.72□□□□□ -0.37
TFE3-201ENST00000315869 PPP1R32Q7Z5V6 425 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 PKDREJQ9NTG1 2253 aa12.72□□□□□ -0.37
TFE3-201ENST00000315869 LOC102723996A0A087X1L8 192 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 IGKV1-6A0A0C4DH72 117 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 CELA3AP09093 270 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 PLA2G5P39877 138 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 ID3Q02535 119 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 ASCL4Q6XD76 172 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 CLDND2Q8NHS1 167 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 COL12A1Q99715 3063 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 PINLYPA6NC86 204 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 DEGS1O15121 323 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BKO60814 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BJP06899 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BOP23527 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 UCP1P25874 307 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BBP33778 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BDP58876 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BCP62807 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST2H2BEQ16778 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.71□□□□□ -0.37
TFE3-201ENST00000315869 LINC00469Q8N7U9 141 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 KDF1Q8NAX2 398 aaPredicted RBP12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BHQ93079 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BNQ99877 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HIST1H2BMQ99879 126 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 SLC39A9Q9NUM3 307 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 GFOD1Q9NXC2 390 aa12.71□□□□□ -0.37
TFE3-201ENST00000315869 HSPB1P04792 205 aaKnown RBP12.71□□□□□ -0.38
TFE3-201ENST00000315869 B3GALT5-AS1P59052 145 aa12.71□□□□□ -0.38
TFE3-201ENST00000315869 NMSQ5H8A3 153 aa12.71□□□□□ -0.38
TFE3-201ENST00000315869 LHX4Q969G2 390 aa12.71□□□□□ -0.38
TFE3-201ENST00000315869 THOC3Q96J01 351 aaKnown RBP12.71□□□□□ -0.38
TFE3-201ENST00000315869 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.38
TFE3-201ENST00000315869 ATP23Q9Y6H3 246 aa12.71□□□□□ -0.38
TFE3-201ENST00000315869 BMP5P22003 454 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 BAXQ07812 192 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 WDR25Q64LD2 544 aaPredicted RBP12.7□□□□□ -0.38
TFE3-201ENST00000315869 ZNF808Q8N4W9 903 aaPredicted RBP12.7□□□□□ -0.38
TFE3-201ENST00000315869 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 MED13LQ71F56 2210 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 SYNGR2O43760 224 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 LILRA1O75019 489 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 CTXN2P0C2S0 81 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 TRGC1P0CF51 173 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 PGA5P0DJD9 388 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 ACP1P24666 158 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 HES3Q5TGS1 186 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 SMIM7Q9BQ49 75 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 OR2W1Q9Y3N9 320 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 ZNF292O60281 2723 aa12.7□□□□□ -0.38
TFE3-201ENST00000315869 CADP27708 2225 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 SPAARA0A1B0GVQ0 90 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 RHBDL1O75783 438 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 FOXO1Q12778 655 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
TFE3-201ENST00000315869 KHDC3LQ587J8 217 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 ZNF506Q5JVG8 444 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 Q6ZRM9 215 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 FAM58AQ8N1B3 248 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 FRZBQ92765 325 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 TLN1Q9Y490 2541 aaKnown RBP12.69□□□□□ -0.38
TFE3-201ENST00000315869 CLDN34H7C241 214 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 KRASP01116 189 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 PMP22Q01453 160 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 APOBEC3DQ96AK3 386 aaPredicted RBP12.69□□□□□ -0.38
TFE3-201ENST00000315869 STRADBQ9C0K7 418 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 SMDT1Q9H4I9 107 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 TINAGQ9UJW2 476 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 TNFSF15O95150 251 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 APLNRP35414 380 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 GLIPR1P48060 266 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 SPINK9Q5DT21 86 aa12.69□□□□□ -0.38
TFE3-201ENST00000315869 SSX3Q99909 188 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms