RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 CT45A3Q8NHU0 189 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 OR2S2Q9NQN1 319 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 LIN7CQ9NUP9 197 aaKnown RBP15.41■□□□□ 0.06
LIME1-201ENST00000309546 GHRLQ9UBU3 117 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 TXNL1O43396 289 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 GLAP06280 429 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 GPR12P47775 334 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 GNMTQ14749 295 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 MED22Q15528 200 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 OR10K2Q6IF99 312 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 ETV3LQ6ZN32 361 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 C8orf86Q6ZUL3 223 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 C5orf24Q7Z6I8 188 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 MS4A15Q8N5U1 240 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 LINC00482Q8N8I6 264 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 KLHL30-AS1Q8NEE0 82 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 OR52L2PQ8NGH6 319 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 MRPL30Q8TCC3 161 aaKnown RBP15.4■□□□□ 0.06
LIME1-201ENST00000309546 RASL11BQ9BPW5 248 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 SCN3BQ9NY72 215 aa15.4■□□□□ 0.06
LIME1-201ENST00000309546 H0YHG0 523 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 AP4M1O00189 453 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 UBBP0CG47 229 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 ZNF137PP52743 207 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 GP2P55259 537 aaKnown RBP15.39■□□□□ 0.05
LIME1-201ENST00000309546 SPHARQ15513 63 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 C6orf141Q5SZD1 244 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 GLT8D1Q68CQ7 371 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 MRPL41Q8IXM3 137 aaKnown RBP15.39■□□□□ 0.05
LIME1-201ENST00000309546 NEDD4LQ96PU5 975 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 S1PR3Q99500 378 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 ABCG5Q9H222 651 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 KCNK15Q9H427 330 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 DCLRE1BQ9H816 532 aa15.39■□□□□ 0.05
LIME1-201ENST00000309546 NKX1-2Q9UD57 310 aaPredicted RBP15.39■□□□□ 0.05
LIME1-201ENST00000309546 DUS4LO95620 317 aaKnown RBP15.38■□□□□ 0.05
LIME1-201ENST00000309546 PPP1CCP36873 323 aaKnown RBP15.38■□□□□ 0.05
LIME1-201ENST00000309546 AQP4P55087 323 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 MORN2Q502X0 79 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 HSD17B12Q53GQ0 312 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 RNLSQ5VYX0 342 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 UNQ9370/PRO34162Q6UXP9 181 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 CEACAM19Q7Z692 300 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 LRRTM1Q86UE6 522 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 COMMD1Q8N668 190 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 SULT4A1Q9BR01 284 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 ABHD14AQ9BUJ0 271 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 TMEM59Q9BXS4 323 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 ZFP57Q9NU63 452 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 MBNL3Q9NUK0 354 aaKnown RBP15.38■□□□□ 0.05
LIME1-201ENST00000309546 JPT1Q9UK76 154 aa15.38■□□□□ 0.05
LIME1-201ENST00000309546 LSM2Q9Y333 95 aaKnown RBP15.38■□□□□ 0.05
LIME1-201ENST00000309546 VSIG8P0DPA2 414 aa15.37■□□□□ 0.05
LIME1-201ENST00000309546 CHATP28329 748 aa15.37■□□□□ 0.05
LIME1-201ENST00000309546 HOXD3P31249 432 aaPredicted RBP15.37■□□□□ 0.05
LIME1-201ENST00000309546 THBS3P49746 956 aa15.37■□□□□ 0.05
LIME1-201ENST00000309546 LIPKQ5VXJ0 399 aa15.37■□□□□ 0.05
LIME1-201ENST00000309546 PHYHIPQ92561 330 aa15.37■□□□□ 0.05
LIME1-201ENST00000309546 LANCL1O43813 399 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 RRP9O43818 475 aaKnown RBP15.36■□□□□ 0.05
LIME1-201ENST00000309546 HSMCR30P0CW71 290 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 MYF6P23409 242 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 HTR2CP28335 458 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 F2RL1P55085 397 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 RPS27AP62979 156 aaKnown RBP15.36■□□□□ 0.05
LIME1-201ENST00000309546 LSAMPQ13449 338 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 C1orf100Q5SVJ3 147 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 TEX38Q6PEX7 206 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 LCNL1Q6ZST4 164 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 C6orf201Q7Z4U5 140 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 ZNF695Q8IW36 515 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 OR8H1Q8NGG4 311 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 DPF1Q92782 380 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 UFD1Q92890 307 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 TMEM203Q969S6 136 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 GALMQ96C23 342 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 DUX3Q96PT4 197 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 HSPB9Q9BQS6 159 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 NICN1Q9BSH3 213 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 FAAP24Q9BTP7 215 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 CHMP1AQ9HD42 196 aaPredicted RBP15.36■□□□□ 0.05
LIME1-201ENST00000309546 PLSCR3Q9NRY6 295 aa15.36■□□□□ 0.05
LIME1-201ENST00000309546 RPLP1P05386 114 aaKnown RBP15.35■□□□□ 0.05
LIME1-201ENST00000309546 SLC2A2P11168 524 aaPredicted RBP15.35■□□□□ 0.05
LIME1-201ENST00000309546 SRMP19623 302 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 SOX6P35712 828 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 RAB25P57735 213 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 UNC119Q13432 240 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 MMDQ15546 238 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 PNLIPRP3Q17RR3 467 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 STEAP3Q658P3 488 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 ZNF554Q86TJ5 538 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 FAM71E2Q8N5Q1 922 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 KCNG3Q8TAE7 436 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 SETD6Q8TBK2 473 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 NRG4Q8WWG1 115 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 GON7Q9BXV9 100 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 MRPL20Q9BYC9 149 aaKnown RBP15.35■□□□□ 0.05
LIME1-201ENST00000309546 TPRKBQ9Y3C4 175 aa15.35■□□□□ 0.05
LIME1-201ENST00000309546 K7EIL1 84 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms