RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 MTCP1P56278 107 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 RAP2BP61225 183 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 POU2AF1Q16633 256 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 XAF1Q6GPH4 301 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 RPL22L1Q6P5R6 122 aaKnown RBP6.9□□□□□ -1.3
CHD6-201ENST00000309279 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 OR5AS1Q8N127 324 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 FTMTQ8N4E7 242 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 OR13D1Q8NGV5 346 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 OR10X1Q8NGY0 326 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 FCAMRQ8WWV6 532 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 C10orf35Q96D05 121 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 MSI2Q96DH6 328 aaKnown RBP6.9□□□□□ -1.3
CHD6-201ENST00000309279 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 JMJD8Q96S16 334 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 V9GYS6 101 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 X6R8D5 127 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 DYSFO75923 2080 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 TMEM212A6NML5 194 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 OR11H12B2RN74 326 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 SPRY3O43610 288 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 MRPS14O60783 128 aaKnown RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 NCR1O76036 304 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 TSPAN13O95857 204 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 LALBAP00709 142 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 HLA-DPB1P04440 258 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 SERPINB10P48595 397 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 RBP2P50120 134 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 ATP1B3P54709 279 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 WNT4P56705 351 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 GABARAPL2P60520 117 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 CCL8P80075 99 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 RIPPLY1Q0D2K3 151 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 CDK5R1Q15078 307 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 SYT6Q5T7P8 510 aaPredicted RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 TMEM244Q5VVB8 128 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 TMEM42Q69YG0 159 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 CCDC144NLQ6NUI1 221 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 RDH10Q8IZV5 341 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 INO80EQ8NBZ0 244 aaPredicted RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 OR11H1Q8NG94 326 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 OR14K1Q8NGZ2 314 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 OR11H2Q8NH07 326 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 OR4K15Q8NH41 348 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 RNASEH2CQ8TDP1 164 aaKnown RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 YIPF6Q96EC8 236 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 SDHCQ99643 169 aaPredicted RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 BARHL1Q9BZE3 327 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 TRIM36Q9NQ86 728 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 GHRLQ9UBU3 117 aa6.9□□□□□ -1.31
CHD6-201ENST00000309279 LSM2Q9Y333 95 aaKnown RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 NOP16Q9Y3C1 178 aaKnown RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 SIRT4Q9Y6E7 314 aaPredicted RBP6.9□□□□□ -1.31
CHD6-201ENST00000309279 TANC2Q9HCD6 1990 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 ZNF816-ZNF321PA0A0X1KG74 233 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 FAM25AB3EWG3 89 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 FAM25CB3EWG5 89 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 FAM25GB3EWG6 89 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 TSTD3H0UI37 97 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 H0YL77 283 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 MYL12BO14950 172 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 SYT7O43581 403 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 PLPP2O43688 288 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 FCN3O75636 299 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 RP2O75695 350 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 LY6HO94772 140 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 HPXP02790 462 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 CA6P23280 308 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 GCSHP23434 173 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 GNRHRP30968 328 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 MAP2K4P45985 399 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 TAS2R43P59537 309 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 IL13RA1P78552 427 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 DOC2BQ14184 412 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 SPHARQ15513 63 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 ODF4Q2M2E3 257 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 DMKNQ6E0U4 476 aaPredicted RBP6.89□□□□□ -1.31
CHD6-201ENST00000309279 C19orf35Q6ZS72 473 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 LGI3Q8N145 548 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 OR2AK2Q8NG84 335 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 OR2Z1Q8NG97 314 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 OR5AK2Q8NH90 309 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 PINX1Q96BK5 328 aaKnown RBP6.89□□□□□ -1.31
CHD6-201ENST00000309279 SMIM19Q96E16 107 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 PDCD1LG2Q9BQ51 273 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 SAP30LQ9HAJ7 183 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 BIN3Q9NQY0 253 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 KCNIP3Q9Y2W7 256 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 MPC1Q9Y5U8 109 aa6.89□□□□□ -1.31
CHD6-201ENST00000309279 FLNAP21333 2647 aaKnown RBP6.88□□□□□ -1.31
CHD6-201ENST00000309279 LOC107986453A0A1B0GWG9 222 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 TMPRSS2O15393 492 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 HOXB5P09067 269 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 OR8U9P0C7N5 309 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 COL8A2P25067 703 aa6.88□□□□□ -1.31
CHD6-201ENST00000309279 PAX6P26367 422 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms