RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ZNF546Q86UE3 836 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 LGI3Q8N145 548 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 BOLLQ8N9W6 283 aaKnown RBP9.93□□□□□ -0.82
TRIM40-205ENST00000307859 BVESQ8NE79 360 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 OR10V1Q8NGI7 309 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ANGPTL6Q8NI99 470 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 PPP1R35Q8TAP8 253 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 LRRC46Q96FV0 321 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 LURAP1Q96LR2 239 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 TP53RKQ96S44 253 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 MFFQ9GZY8 342 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 CCL28Q9NRJ3 127 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 ERRFI1Q9UJM3 462 aaPredicted RBP9.93□□□□□ -0.82
TRIM40-205ENST00000307859 U3KQ87 197 aa9.93□□□□□ -0.82
TRIM40-205ENST00000307859 MGST3O14880 152 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 PHF1O43189 567 aaPredicted RBP9.92□□□□□ -0.82
TRIM40-205ENST00000307859 IFNA21P01568 189 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 LYL1P12980 280 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 TNFRSF1AP19438 455 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 CD80P33681 288 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 GABRA2P47869 451 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 GLIPR1P48060 266 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 CDSNQ15517 529 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 EFNB3Q15768 340 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 FAM209AQ5JX71 171 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 GGNBP1Q5YKI7 109 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 STUMQ69YW2 141 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 CMTM1Q8IZ96 169 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 PRR18Q8N4B5 295 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 LHFPL5Q8TAF8 219 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 THAP6Q8TBB0 222 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 TMEM222Q9H0R3 208 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 NCOR1P1Q9H4R4 102 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 MBD2Q9UBB5 411 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 ADGRG4Q8IZF6 3080 aa9.92□□□□□ -0.82
TRIM40-205ENST00000307859 CELSR2Q9HCU4 2923 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 PKDREJQ9NTG1 2253 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 RNF222A6NCQ9 220 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 K7N7A8 449 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 HSD17B6O14756 317 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 OR2F2O95006 317 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 HBZP02008 142 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 UCP1P25874 307 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 LUMP51884 338 aaPredicted RBP9.91□□□□□ -0.82
TRIM40-205ENST00000307859 OR2F1Q13607 317 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 SNTB1Q13884 538 aaKnown RBP9.91□□□□□ -0.82
TRIM40-205ENST00000307859 CR1LQ2VPA4 569 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 FAM201AQ5SY85 155 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 TEX36Q5VZQ5 186 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF561Q8N587 486 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 KCNRGQ8N5I3 272 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 ZNF680Q8NEM1 530 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 OR8H1Q8NGG4 311 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 UBALD1Q8TB05 177 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 LINC01560Q8TB33 94 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 CA5BP1Q8WTZ4 195 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 GALMQ96C23 342 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 SDSLQ96GA7 329 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 RNF126Q9BV68 326 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 DNTTIP1Q9H147 329 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 FBXO9Q9UK97 447 aaPredicted RBP9.91□□□□□ -0.82
TRIM40-205ENST00000307859 PPP1R3CQ9UQK1 317 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 MAB21L2Q9Y586 359 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 FBN3Q75N90 2809 aa9.91□□□□□ -0.82
TRIM40-205ENST00000307859 ANKHD1Q8IWZ3 2542 aaKnown RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 A0A0D9SG52 128 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 H0Y980 276 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 H0YIZ8 118 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 C15orf65H3BRN8 121 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 SIAH2O43255 324 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 HSPA12AO43301 675 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 PGLYRP1O75594 196 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 CYB5R3P00387 301 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 IGLV2-14P01704 120 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 IRF2P14316 349 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 MUC1P15941 1255 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 S100GP29377 79 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 APOBEC3AP31941 199 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 CCL8P80075 99 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 TFF3Q07654 80 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 IAH1Q2TAA2 248 aaPredicted RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 BEX5Q5H9J7 111 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 PRSS54Q6PEW0 395 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 ACOT7LQ6ZUV0 252 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 OR13A1Q8NGR1 328 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 MRGPRDQ8TDS7 321 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 NEUROG1Q92886 237 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 AKR1E2Q96JD6 320 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 TMEM56Q96MV1 263 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 ARL6Q9H0F7 186 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 PARP12Q9H0J9 701 aaKnown RBP9.9□□□□□ -0.82
TRIM40-205ENST00000307859 KCNJ16Q9NPI9 418 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 RNF115Q9Y4L5 304 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 TMEM56-RWDD3S4R434 201 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 USF3Q68DE3 2245 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 ARID1AO14497 2285 aa9.9□□□□□ -0.82
TRIM40-205ENST00000307859 DUXBA0A1W2PPF3 345 aa9.89□□□□□ -0.83
TRIM40-205ENST00000307859 ODAMA1E959 279 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms