RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR5H6Q8NGV6 325 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RAB2BQ8WUD1 216 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 AP3S1Q92572 193 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TOMM40LQ969M1 308 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CYYR1Q96J86 154 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 BCL7BQ9BQE9 202 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CHIAQ9BZP6 476 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 DCSTAMPQ9H295 470 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OR2S2Q9NQN1 319 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 DIABLOQ9NR28 239 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PSG11Q9UQ72 335 aa8.91□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 A0A0A6YYH2 397 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 A6NJ64 397 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 OOSP1A8MZH6 123 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 HSPA12AO43301 675 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 FCGR3AP08637 254 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GSTP1P09211 210 aaKnown RBP8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PAX6P26367 422 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 BRS3P32247 399 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SOX6P35712 828 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 KIR2DS4P43632 304 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LOXL3P58215 753 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RPL15P61313 204 aaKnown RBP8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PITPNAQ00169 270 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MADCAM1Q13477 382 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 KIR2DS1Q14954 304 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CTF1Q16619 201 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 CDNFQ49AH0 187 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 TPTE2P1Q5T6R2 138 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 DHRS7BQ6IAN0 325 aaPredicted RBP8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 MZT2AQ6P582 158 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 LIAT1Q6ZQX7 453 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SAMD12Q8N8I0 201 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 ACOT12Q8WYK0 555 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 GCDHQ92947 438 aaPredicted RBP8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 SLC25A38Q96DW6 304 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 Q9N2K0 584 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 RAB18Q9NP72 206 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 PITPNC1Q9UKF7 332 aa8.9□□□□□ -0.98
CSPG4P1Y-201ENST00000306641 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 A0A1W2PPE3 182 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM181BA6NEQ2 426 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CCDC160A6NGH7 325 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GPR137BO60478 399 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 YPEL1O60688 119 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DTYMKP23919 212 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 PPP1CCP36873 323 aaKnown RBP8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 RAB7AP51149 207 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TMBIM6P55061 237 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LY6EQ16553 131 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 PNLIPRP3Q17RR3 467 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LINC00311Q8N616 119 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 C8orf31Q8N9H6 132 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR2AK2Q8NG84 335 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR52L2PQ8NGH6 319 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 AJUBAQ96IF1 538 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 YPEL2Q96QA6 119 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OCSTAMPQ9BR26 566 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ABHD14AQ9BUJ0 271 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ABCG5Q9H222 651 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 COMMD3Q9UBI1 195 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SLC23A1Q9UHI7 598 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 KCNK7Q9Y2U2 307 aa8.89□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TRAV18A0A075B6X5 111 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TMEM235A6NFC5 223 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 VGLL3A8MV65 326 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TRDCB7Z8K6 153 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 HSD17B6O14756 317 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 HKR1P10072 659 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF182P17025 639 aaPredicted RBP8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZBTB25P24278 435 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DYNLT3P51808 116 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FOXL1Q12952 345 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 GNMTQ14749 295 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 ZNF260Q3ZCT1 412 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 MORN2Q502X0 79 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LDLRAD2Q5SZI1 272 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 UTF1Q5T230 341 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 HACD4Q5VWC8 232 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SLC25A48Q6ZT89 311 aaKnown RBP8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR8H3Q8N146 312 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 LYG1Q8N1E2 194 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 DYNAPQ8N1N2 210 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 OR4A4PQ8NGN8 299 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 CAPSLQ8WWF8 208 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 EDARADDQ8WWZ3 215 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 MDFIQ99750 246 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TCF19Q9Y242 345 aa8.88□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SMIM31A0A1B0GVY4 71 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 SLC31A2O15432 143 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 FABP7O15540 132 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 TXNL1O43396 289 aa8.87□□□□□ -0.99
CSPG4P1Y-201ENST00000306641 XRCC3O43542 346 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms