RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CTXN2P0C2S0 81 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 MEOX1P50221 254 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 GNG3P63215 75 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 HOXA4Q00056 320 aaPredicted RBP12.85□□□□□ -0.35
CSDC2-201ENST00000306149 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 ATP1A1-AS1Q5TC04 95 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 THNSL2Q86YJ6 484 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 BCL2L14Q9BZR8 327 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 ZFHX4Q86UP3 3567 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 DEGS1O15121 323 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 CELA3BP08861 270 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 COX5BP10606 129 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 IAPPP10997 89 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 MPLP40238 635 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 TLE4Q04727 773 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 IL24Q13007 206 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 MDP1Q86V88 176 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 RBM7Q9Y580 266 aaKnown RBP12.84□□□□□ -0.35
CSDC2-201ENST00000306149 DOCK11Q5JSL3 2073 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 TAGLN2P37802 199 aaKnown RBP12.84□□□□□ -0.35
CSDC2-201ENST00000306149 UBE2KP61086 200 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 ERVS71-1P61550 626 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF429Q86V71 674 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 SPOCK3Q9BQ16 436 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 ZPBPQ9BS86 351 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
CSDC2-201ENST00000306149 CXorf65A6NEN9 183 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 IGKV1-39P01597 117 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 IGHV2-70P01814 119 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 IGKV1D-39P04432 117 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 PLA2G5P39877 138 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 RPS10P46783 165 aaKnown RBP12.83□□□□□ -0.36
CSDC2-201ENST00000306149 RAB2AP61019 212 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 HLA-DRB3P79483 266 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 KIAA0141Q14154 515 aaPredicted RBP12.83□□□□□ -0.36
CSDC2-201ENST00000306149 ALKBH6Q3KRA9 238 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 SLC25A24Q6NUK1 477 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.83□□□□□ -0.36
CSDC2-201ENST00000306149 H1FOOQ8IZA3 346 aaPredicted RBP12.83□□□□□ -0.36
CSDC2-201ENST00000306149 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 SIRT7Q9NRC8 400 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 WSB1Q9Y6I7 421 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 BOD1L1Q8NFC6 3051 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 SVILO95425 2214 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 KMT2EQ8IZD2 1858 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 CNOT4O95628 575 aaKnown RBP12.83□□□□□ -0.36
CSDC2-201ENST00000306149 HOXA5P20719 270 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 TAS2R30P59541 319 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 DLK1P80370 383 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 HNF4GQ14541 408 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 ELOBQ15370 118 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 NCMAPQ5T1S8 102 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 WDR86Q86TI4 376 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 GTF3AQ92664 365 aaKnown RBP12.83□□□□□ -0.36
CSDC2-201ENST00000306149 TVP23CQ96ET8 276 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 OR51I2Q9H344 312 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 ABI3Q9P2A4 366 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 CACNG5Q9UF02 275 aa12.83□□□□□ -0.36
CSDC2-201ENST00000306149 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 PIGBOS1A0A0B4J2F0 54 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 NDUFS6O75380 124 aaKnown RBP12.82□□□□□ -0.36
CSDC2-201ENST00000306149 DFFBO76075 338 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 IGLV2-14P01704 120 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 SLC25A6P12236 298 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 KHDC3LQ587J8 217 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 FAM180AQ6UWF9 173 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 OR10V1Q8NGI7 309 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 Q8WTZ3 238 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 NIPSNAP3BQ9BS92 247 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 KCNS2Q9ULS6 477 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 KIAA1324LA8MWY0 1029 aaPredicted RBP12.82□□□□□ -0.36
CSDC2-201ENST00000306149 WDR1O75083 606 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 SP1P08047 785 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 METTL15P1P0C7V9 234 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
CSDC2-201ENST00000306149 ZNF343Q6P1L6 599 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 LINC00596Q86U02 117 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 STX12Q86Y82 276 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 OR1K1Q8NGR3 316 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 RIMS4Q9H426 269 aaPredicted RBP12.82□□□□□ -0.36
CSDC2-201ENST00000306149 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 VSIRQ9H7M9 311 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 MPC1Q9Y5U8 109 aa12.82□□□□□ -0.36
CSDC2-201ENST00000306149 TRBV6-6A0A0A6YYG2 114 aa12.81□□□□□ -0.36
CSDC2-201ENST00000306149 CEBPDP49716 269 aaPredicted RBP12.81□□□□□ -0.36
CSDC2-201ENST00000306149 TESK1Q15569 626 aa12.81□□□□□ -0.36
CSDC2-201ENST00000306149 RNFT1Q5M7Z0 435 aa12.81□□□□□ -0.36
CSDC2-201ENST00000306149 Q6P435 159 aa12.81□□□□□ -0.36
CSDC2-201ENST00000306149 TOLLIPQ9H0E2 274 aa12.81□□□□□ -0.36
CSDC2-201ENST00000306149 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms