RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 GLT8D1Q68CQ7 371 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 MRPL41Q8IXM3 137 aaKnown RBP13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 PRR18Q8N4B5 295 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 Q8N9W7 124 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 PHYHIPQ92561 330 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 S1PR3Q99500 378 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 OR2S2Q9NQN1 319 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 JPT1Q9UK76 154 aa13.15□□□□□ -0.3
TRAPPC1-201ENST00000303731 LANCL1O43813 399 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 CDK1P06493 297 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 GP2P55259 537 aaKnown RBP13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 HTD2P86397 168 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 EGFEM1PQ0D2K5 195 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 CT45A1Q5HYN5 189 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 LY6G6FQ5SQ64 297 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 ETV3LQ6ZN32 361 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 OR1L1Q8NH94 360 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 CT45A3Q8NHU0 189 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 TFAP2CQ92754 450 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 ZNF580Q9UK33 172 aa13.14□□□□□ -0.31
TRAPPC1-201ENST00000303731 UBE2QL1A1L167 161 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 H0YHG0 523 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 SLC31A2O15432 143 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 OR5H8P0DN80 308 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 ZNF134P52741 427 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 MORN2Q502X0 79 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 ACSM3Q53FZ2 586 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 SIGIRRQ6IA17 410 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 UNQ9370/PRO34162Q6UXP9 181 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 FAM71E2Q8N5Q1 922 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 OR10V1Q8NGI7 309 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 NEDD4LQ96PU5 975 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 ABHD14AQ9BUJ0 271 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 DCLRE1BQ9H816 532 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 LINC00527Q9UJ94 153 aa13.13□□□□□ -0.31
TRAPPC1-201ENST00000303731 MPIG6BO95866 241 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 ELANEP08246 267 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 SOX6P35712 828 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 FOXE3Q13461 319 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 SPHARQ15513 63 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 RBM48Q5RL73 367 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 KCNG3Q8TAE7 436 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 MRPL30Q8TCC3 161 aaKnown RBP13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 FAM46BQ96A09 425 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 GALMQ96C23 342 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 TMEM59Q9BXS4 323 aa13.12□□□□□ -0.31
TRAPPC1-201ENST00000303731 YPEL1O60688 119 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 BPNT1O95861 308 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 IGF1P05019 195 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 VDAC1P21796 283 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 CHATP28329 748 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 VHLP40337 213 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 RANBP1P43487 201 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 LSAMPQ13449 338 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 NKAPLQ5M9Q1 402 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 C1orf100Q5SVJ3 147 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 C6orf141Q5SZD1 244 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 OR8U1Q8NH10 309 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 YPEL2Q96QA6 119 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 P2RX4Q99571 388 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 ABRACLQ9P1F3 81 aa13.11□□□□□ -0.31
TRAPPC1-201ENST00000303731 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 VSIG8P0DPA2 414 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 SRMP19623 302 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 CDX1P47902 265 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 HSD17B12Q53GQ0 312 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 FAM53AQ6NSI3 398 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 LRRTM1Q86UE6 522 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 OR2AK2Q8NG84 335 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 TMED9Q9BVK6 235 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 STEAP1Q9UHE8 339 aa13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 LSM2Q9Y333 95 aaKnown RBP13.1□□□□□ -0.31
TRAPPC1-201ENST00000303731 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 PTGES3LE9PB15 166 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 K7EIL1 84 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 SLC22A1O15245 554 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 IGHG4P01861 327 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 HTR2CP28335 458 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 MED22Q15528 200 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 MMDQ15546 238 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 TRAM1Q15629 374 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 HMGN3Q15651 99 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 MOB1BQ7L9L4 216 aa13.09□□□□□ -0.31
TRAPPC1-201ENST00000303731 OR6M1Q8NGM8 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms