RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TTRP02766 147 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 RPL29P47914 159 aaKnown RBP6.74□□□□□ -1.33
SCN9A-201ENST00000303354 ATP5G2Q06055 141 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 WDR54Q9H977 334 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 PLAC1Q9HBJ0 212 aa6.74□□□□□ -1.33
SCN9A-201ENST00000303354 A0A1W2PQD3 144 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 J3QT63 122 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 FXYD1O00168 92 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 FCGR3AP08637 254 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 UNQ9370/PRO34162Q6UXP9 181 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 NEIL1Q96FI4 390 aaPredicted RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 POM121Q96HA1 1249 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 FAM210BQ96KR6 192 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SLC45A2Q9UMX9 530 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 PSMB11A5LHX3 300 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SIGLEC5O15389 551 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 PLPP2O43688 288 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SS18L1O75177 396 aaPredicted RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 GZMHP20718 246 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR1L6Q8NGR2 347 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR2T8A6NH00 312 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 DHRS2Q13268 280 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR10J6PQ8NGY7 276 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 LAMA4Q16363 1823 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 RPL36A-HNRNPH2H7BZ11 118 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 PPYP01298 95 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 AMY1AP04745 511 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 MOB1BQ7L9L4 216 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR2C3Q8N628 320 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 ASB13Q8WXK3 278 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 MEGF10Q96KG7 1140 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 RSG1Q9BU20 258 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 PRO1933Q9H354 126 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SRSF10O75494 262 aaKnown RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 PTBP3O95758 552 aaKnown RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 CELA3BP08861 270 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 RPS4Y1P22090 263 aaKnown RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 CLEC18BQ6UXF7 455 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR2W3Q7Z3T1 314 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF485Q8NCK3 441 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 PGLYRP3Q96LB9 341 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 GON7Q9BXV9 100 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 NIT2Q9NQR4 276 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 HIGD1AQ9Y241 93 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 LAMB1P07942 1786 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 SSBP3Q9BWW4 388 aaPredicted RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 FBXL17Q9UF56 701 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 CEACAM18A8MTB9 384 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 RECKO95980 971 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 P01737 135 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 TRGV3P03979 118 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 GCSHP23434 173 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 RPL27AP46776 148 aaKnown RBP6.73□□□□□ -1.33
SCN9A-201ENST00000303354 FAM24BQ8N5W8 94 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR5A2Q8NGI9 324 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 IDI2-AS1Q9NZ38 188 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 CST4P01036 141 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 KLK2P20151 261 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 TAS2R60P59551 318 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 ABLIM2Q6H8Q1 611 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 OR4A5Q8NH83 315 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 NEU1Q99519 415 aa6.73□□□□□ -1.33
SCN9A-201ENST00000303354 ANKRD12Q6UB98 2062 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ISG15P05161 165 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 MELTFP08582 738 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 SLC26A10Q8NG04 563 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 NUDT16L1Q9BRJ7 211 aaKnown RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ANGPTL4Q9BY76 406 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 C5orf52A6NGY3 159 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 M0R2Z0 102 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 CEACAM1P13688 526 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 SYNGR2O43760 224 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 TSPAN2O60636 221 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 PRSS8Q16651 343 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 MOGAT2Q3SYC2 334 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 DOLPP1Q86YN1 238 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 PHOX2AO14813 284 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 SLC6A1P30531 599 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 TMEM50BP56557 158 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ZDHHC22Q8N966 263 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 C19orf43Q9BQ61 176 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 UQCC2Q9BRT2 126 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 RAB29O14966 203 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ZP4Q12836 540 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 CARFQ8N187 725 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ISOC2Q96AB3 205 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 CA10Q9NS85 328 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ANXA10Q9UJ72 324 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 MFNGO00587 321 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 IGKV1D-33P01593 117 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 IGKV1-33P01594 117 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 PPOXP50336 477 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 TMEM255AQ5JRV8 349 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 ZNF426Q9BUY5 554 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 MYO5AQ9Y4I1 1855 aaKnown RBP6.72□□□□□ -1.33
SCN9A-201ENST00000303354 SCN3AQ9NY46 2000 aa6.72□□□□□ -1.33
SCN9A-201ENST00000303354 BCL2L11O43521 198 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms