RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PPP1R3EQ9H7J1 279 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 OR51B2Q9Y5P1 312 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 COX6CP09669 75 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF250P15622 560 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ACER2Q5QJU3 275 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 SFTPA2Q8IWL1 248 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 SFTPA1Q8IWL2 248 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 OR8B3Q8NGG8 313 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 OR8B2Q96RD0 313 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 FLRT3Q9NZU0 649 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 DOK5Q9P104 306 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TRBV5-5A0A0J9YX44 114 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 MRGPRFQ96AM1 343 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 MRPS16Q9Y3D3 137 aaKnown RBP6.69□□□□□ -1.34
SF3B3-201ENST00000302516 GNG7O60262 68 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 RELBQ01201 579 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 JOSD1Q15040 202 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-201ENST00000302516 OR11G2Q8NGC1 345 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 SGMS2Q8NHU3 365 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 MRPL24Q96A35 216 aaKnown RBP6.69□□□□□ -1.34
SF3B3-201ENST00000302516 M0R3E3 92 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TCF21O43680 179 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ATP6V0CP27449 155 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ZP4Q12836 540 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 GAMTQ14353 236 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TNXAQ16473 311 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 PSMG4Q5JS54 123 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 SLC35E4Q6ICL7 350 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 DGAT2L7PQ6IED9 249 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TDHQ8IZJ6 230 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 EID2BQ96D98 161 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 IGHV1OR21-1A0A087WYE8 117 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 CD1BP29016 333 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 DOCK6Q96HP0 2047 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 DDA1Q9BW61 102 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 CYR61O00622 381 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 PAGE4O60829 102 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ATP5IP56385 69 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM91Q6ZNR0 172 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF645Q8N7E2 425 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 Q8WTZ3 238 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 RAB37Q96AX2 223 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 FLYWCH2Q96CP2 140 aaKnown RBP6.69□□□□□ -1.34
SF3B3-201ENST00000302516 ASCL3Q9NQ33 180 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 COA4Q9NYJ1 87 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 CLN8Q9UBY8 286 aa6.69□□□□□ -1.34
SF3B3-201ENST00000302516 APC2O95996 2303 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 SOCS1O15524 211 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 WISP3O95389 354 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-201ENST00000302516 VSIG8P0DPA2 414 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 PNLIPP16233 465 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF83P51522 516 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 DEFB109BQ30KR1 87 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 ALKBH6Q3KRA9 238 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 PAXXQ9BUH6 204 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 RAB29O14966 203 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 CXCL2P19875 107 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 RPS11P62280 158 aaKnown RBP eCLIP6.68□□□□□ -1.34
SF3B3-201ENST00000302516 VCX2Q9H322 139 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 CEP290O15078 2479 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 TRAV8-7A0A075B6U6 113 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 GAGE10A6NGK3 116 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 C21orf140B9A014 251 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 H3BVH4 76 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 WIPI1Q5MNZ9 446 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-201ENST00000302516 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
SF3B3-201ENST00000302516 RAB1CQ92928 201 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 BRWD3Q6RI45 1802 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 IGHV5-51A0A0C4DH38 117 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 IFNL4K9M1U5 179 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 PPM1DO15297 605 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 INO80CQ6PI98 192 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-201ENST00000302516 LYZL2Q7Z4W2 148 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 OR1N2Q8NGR9 330 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 OR4X1Q8NH49 305 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 HSF4Q9ULV5 492 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 IGHV3-64DA0A0J9YX35 117 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 FCGR3AP08637 254 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 CDX1P47902 265 aaPredicted RBP6.68□□□□□ -1.34
SF3B3-201ENST00000302516 SAXO1Q8IYX7 474 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 ALG14Q96F25 216 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 CYB5R2Q6BCY4 276 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 MS4A3Q96HJ5 214 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 SPINK9Q5DT21 86 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 SYT8Q8NBV8 401 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 OR2Y1Q8NGV0 311 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 SSMEM1Q8WWF3 244 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF665Q9H7R5 613 aa6.68□□□□□ -1.34
SF3B3-201ENST00000302516 FOLR2P14207 255 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 DAOP14920 347 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CTGFP29279 349 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 HYAL1Q12794 435 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CD200R1LQ6Q8B3 271 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PGLYRP3Q96LB9 341 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PSMG3Q9BT73 122 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PLP1P60201 277 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 FAM181AQ8N9Y4 354 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 IL17BQ9UHF5 180 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms