RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SPIN2BQ9BPZ2 258 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 TREM2Q9NZC2 230 aa10.97□□□□□ -0.65
HIF3A-204ENST00000300862 KMT2EQ8IZD2 1858 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 EP300Q09472 2414 aaPredicted RBP10.96□□□□□ -0.65
HIF3A-204ENST00000300862 SIRPB1O00241 398 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 TNFSF15O95150 251 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 PSG2P11465 335 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 GPX4P36969 197 aaPredicted RBP10.96□□□□□ -0.65
HIF3A-204ENST00000300862 SLC10A1Q14973 349 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 MUCL1Q96DR8 90 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 PFDN5Q99471 154 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 TAAR3PQ9P1P4 343 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 STRAPQ9Y3F4 350 aaKnown RBP10.96□□□□□ -0.65
HIF3A-204ENST00000300862 MMP24Q9Y5R2 645 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 PUS1Q9Y606 427 aaKnown RBP eCLIP10.96□□□□□ -0.65
HIF3A-204ENST00000300862 SVILO95425 2214 aa10.96□□□□□ -0.65
HIF3A-204ENST00000300862 SPENQ96T58 3664 aaKnown RBP10.96□□□□□ -0.66
HIF3A-204ENST00000300862 C21orf140B9A014 251 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 DEGS1O15121 323 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 F2RP25116 425 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 RPS10P46783 165 aaKnown RBP10.96□□□□□ -0.66
HIF3A-204ENST00000300862 ID3Q02535 119 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF266Q14584 549 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 RNPS1Q15287 305 aaKnown RBP10.96□□□□□ -0.66
HIF3A-204ENST00000300862 ALKBH6Q3KRA9 238 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF324BQ6AW86 544 aaPredicted RBP10.96□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF573Q86YE8 665 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 IL22RA1Q8N6P7 574 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 OR1K1Q8NGR3 316 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 PPP1R3CQ9UQK1 317 aa10.96□□□□□ -0.66
HIF3A-204ENST00000300862 CDX4O14627 284 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-204ENST00000300862 PITX3O75364 302 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 CDX1P47902 265 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-204ENST00000300862 PMP22Q01453 160 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 HAGHQ16775 308 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 Q6ZRM9 215 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 WDR86Q86TI4 376 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 OR51I2Q9H344 312 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 SPRR3Q9UBC9 169 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF883P0CG24 379 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF16P17020 682 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-204ENST00000300862 PAX9P55771 341 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 TMEM267Q0VDI3 215 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-204ENST00000300862 SRSF7Q16629 238 aaKnown RBP eCLIP10.95□□□□□ -0.66
HIF3A-204ENST00000300862 GCNT2Q8N0V5 402 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF383Q8NA42 475 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 BCL2L2Q92843 193 aaPredicted RBP10.95□□□□□ -0.66
HIF3A-204ENST00000300862 GPR146Q96CH1 333 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 POM121Q96HA1 1249 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 PBDC1Q9BVG4 233 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 ZFHX4Q86UP3 3567 aa10.95□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF727A8MUV8 499 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 H0Y980 276 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 ATXN7O15265 892 aaPredicted RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 LY86O95711 162 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 SERPINE2P07093 398 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 CTXN2P0C2S0 81 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 SP9P0CG40 484 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 HLA-DRB3P79483 266 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 FBXW9Q5XUX1 488 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 MDS2Q8NDY4 140 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 OR5D13Q8NGL4 314 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 RNASE11Q8TAA1 199 aaKnown RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 OR2J1Q9GZK6 312 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 DOK5Q9P104 306 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 KLF13Q9Y2Y9 288 aaPredicted RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 RNF115Q9Y4L5 304 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 MPC1Q9Y5U8 109 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 CACNA1HO95180 2353 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 OR5B21A6NL26 309 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 KLRC4-KLRK1H3BQV0 150 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 WISP2O76076 250 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 IDH3GP51553 393 aaPredicted RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 NDUFA6P56556 154 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 IL24Q13007 206 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 SOHLH1Q5JUK2 328 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 ZNF343Q6P1L6 599 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 SPSB3Q6PJ21 355 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 H1FOOQ8IZA3 346 aaPredicted RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 WDYHV1Q96HA8 205 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 PRDM13Q9H4Q3 707 aa10.94□□□□□ -0.66
HIF3A-204ENST00000300862 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 RBM7Q9Y580 266 aaKnown RBP10.94□□□□□ -0.66
HIF3A-204ENST00000300862 A0A1B0GW64 132 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 CDIPTO14735 213 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 CXCL1P09341 107 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 CEBPDP49716 269 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-204ENST00000300862 HES3Q5TGS1 186 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 FAM53AQ6NSI3 398 aaPredicted RBP10.93□□□□□ -0.66
HIF3A-204ENST00000300862 Q6P435 159 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 Q8WTZ3 238 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 PLK3Q9H4B4 646 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 HSPA12AO43301 675 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 LYZL6O75951 148 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 CNOT4O95628 575 aaKnown RBP10.93□□□□□ -0.66
HIF3A-204ENST00000300862 OR2H2O95918 312 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 IGKV1-39P01597 117 aa10.93□□□□□ -0.66
HIF3A-204ENST00000300862 IGLV2-14P01704 120 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms