RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RSG1Q9BU20 258 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR5AC2Q9NZP5 309 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MFSD2BA6NFX1 497 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 C16orf97H3BN30 126 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 M0R3E3 92 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CXorf1O96002 111 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 REG1AP05451 166 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SCAND1P57086 179 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF79Q15937 498 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ATP1A1-AS1Q5TC04 95 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 TEPPQ6URK8 271 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 TMEM251Q8N6I4 163 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PTX4Q96A99 478 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HIGD1AQ9Y241 93 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CCL27Q9Y4X3 112 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HAX1O00165 279 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CYB5R3P00387 301 aaPredicted RBP11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GUCA2BQ16661 112 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SCTP09683 121 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ATP6V0CP27449 155 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RPL31P62899 125 aaKnown RBP11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 TEX30Q5JUR7 227 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PRNDQ9UKY0 176 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HERVK_113P61574 105 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PSG4Q00888 419 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CES1P1Q9UKY3 287 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 H3BTX0 84 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ROM1Q03395 351 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ASCL5Q7RTU5 278 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PAXXQ9BUH6 204 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PIPOXQ9P0Z9 390 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OPN4Q9UHM6 478 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HIST1H1BP16401 226 aaKnown RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 COMPP49747 757 aaPredicted RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 NKX2-8O15522 239 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 FCGR3AP08637 254 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 DLX1P56177 255 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RBM11P57052 281 aaKnown RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RSPO4Q2I0M5 234 aaPredicted RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PLPPR5Q32ZL2 321 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PPIAL4EA0A075B759 164 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 A0A0J9YW62 118 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PPIAL4DF5H284 164 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PPIAL4FP0DN26 164 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 VDAC1P21796 283 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OTX1P32242 354 aaPredicted RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 NUBP1P53384 320 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RAG2P55895 527 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 C1orf185Q5T7R7 199 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR1N2Q8NGR9 330 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PPIAL4AQ9Y536 164 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 A0A1W2PQF6 199 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 IGHV4-34P06331 123 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 VSIG10L2P0DP72 767 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GZMHP20718 246 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GABRA6Q16445 453 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PRSS53Q2L4Q9 553 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CHST5Q9GZS9 411 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF552Q9H707 407 aaPredicted RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HEXA-AS1Q9H8Q6 139 aa11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ELF5Q9UKW6 265 aaPredicted RBP11.79□□□□□ -0.52
CHRFAM7A-201ENST00000299847 FOCADQ5VW36 1801 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CORTO00230 105 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CTSBP07858 339 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LY6EQ16553 131 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SLC25A53Q5H9E4 307 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ADIPOR1Q96A54 375 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GMPPAQ96IJ6 420 aaPredicted RBP11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SGK494Q96LW2 274 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PDE6DO43924 150 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HOXA4Q00056 320 aaPredicted RBP11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 WFDC6Q9BQY6 131 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MYO7AQ13402 2215 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HBZP02008 142 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR1L8Q8NGR8 309 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GHITMQ9H3K2 345 aa11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 METTL1Q9UBP6 276 aaKnown RBP11.78□□□□□ -0.52
CHRFAM7A-201ENST00000299847 C21orf140B9A014 251 aa11.77□□□□□ -0.52
CHRFAM7A-201ENST00000299847 M0R143 59 aa11.77□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF714Q96N38 554 aa11.77□□□□□ -0.52
CHRFAM7A-201ENST00000299847 AMELYQ99218 206 aa11.77□□□□□ -0.52
CHRFAM7A-201ENST00000299847 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGHV3-48P01763 117 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 KLK2P20151 261 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 ZNF638Q14966 1978 aaKnown RBP11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 PRF1P14222 555 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 SSTR5P35346 364 aa11.77□□□□□ -0.53
CHRFAM7A-201ENST00000299847 CHAC2Q8WUX2 184 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms