RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-202ENST00000297979 COL10A1Q03692 680 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 GCSAMQ8N6F7 178 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 GALNT14Q96FL9 552 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 KCNIP3Q9Y2W7 256 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 ZNF729A6NN14 1252 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-202ENST00000297979 NPIPB11E5RHQ5 1161 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 ARPC5O15511 151 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 CXCL2P19875 107 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 SLC35E4Q6ICL7 350 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 SECTM1Q8WVN6 248 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 RNASE6Q93091 150 aaKnown RBP11.97□□□□□ -0.49
C9orf3-202ENST00000297979 OR51M1Q9H341 326 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 DNAJB11Q9UBS4 358 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 POLEQ07864 2286 aa11.97□□□□□ -0.49
C9orf3-202ENST00000297979 MFSD2BA6NFX1 497 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 TFF1P04155 84 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 C4BPBP20851 252 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 OR3A1P47881 315 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 ADORA2A-AS1P86434 159 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 HMGN3Q15651 99 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 LRRC37A5PQ49AS3 106 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 FAM185AQ8N0U4 392 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 BOLLQ8N9W6 283 aaKnown RBP11.96□□□□□ -0.49
C9orf3-202ENST00000297979 OR11L1Q8NGX0 322 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 NMES1Q9C002 83 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 METTL8Q9H825 291 aaKnown RBP11.96□□□□□ -0.49
C9orf3-202ENST00000297979 MED19A0JLT2 244 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-202ENST00000297979 PSG2P11465 335 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 HNF1AP20823 631 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 GNRHRP30968 328 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 PRDX2P32119 198 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 CYCSP99999 105 aaKnown RBP11.96□□□□□ -0.49
C9orf3-202ENST00000297979 NCMAPQ5T1S8 102 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 H1FOOQ8IZA3 346 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-202ENST00000297979 CD177Q8N6Q3 437 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 SPTA1P02549 2419 aa11.96□□□□□ -0.49
C9orf3-202ENST00000297979 IGKV1D-13A0A0B4J2D9 117 aa11.96□□□□□ -0.5
C9orf3-202ENST00000297979 NKX2-6A6NCS4 301 aa11.96□□□□□ -0.5
C9orf3-202ENST00000297979 LHBP01229 141 aa11.96□□□□□ -0.5
C9orf3-202ENST00000297979 OR5AC1P0C628 307 aa11.96□□□□□ -0.5
C9orf3-202ENST00000297979 IGKV1-13P0DP09 117 aa11.96□□□□□ -0.5
C9orf3-202ENST00000297979 SEBOXQ9HB31 216 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-202ENST00000297979 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 M0R233 179 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 PRRX1P54821 245 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 AESQ08117 197 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 TMEM187Q14656 261 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 C11orf87Q6NUJ2 197 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 PLPPR2Q96GM1 343 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 COQ2Q96H96 371 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 TAF9BQ9HBM6 251 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 GCM1Q9NP62 436 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 C19orf12Q9NSK7 152 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 RDH8Q9NYR8 311 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 KCNIP1Q9NZI2 227 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 MIOXQ9UGB7 285 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 NDRG3Q9UGV2 375 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 KIF25Q9UIL4 384 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 OR2W1Q9Y3N9 320 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 GPR31O00270 319 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 HOXB5P09067 269 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 SLC25A4P12235 298 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 GABRA2P47869 451 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 RND3P61587 244 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 SP6Q3SY56 376 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 ERGIC1Q969X5 290 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 HEXA-AS1Q9H8Q6 139 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 OR1A1Q9P1Q5 309 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 RNF7Q9UBF6 113 aa11.95□□□□□ -0.5
C9orf3-202ENST00000297979 CHD8Q9HCK8 2581 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 SHISA9B4DS77 424 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 I3L521 148 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 MPPED1O15442 326 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 ADH4P08319 380 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 RPA2P15927 270 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 DEFA6Q01524 100 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 SNTB1Q13884 538 aaKnown RBP11.94□□□□□ -0.5
C9orf3-202ENST00000297979 ZNF818PQ6ZRF7 136 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 Q8TCH9 128 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 LRRC46Q96FV0 321 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 PAX5Q02548 391 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 OPCMLQ14982 345 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 ZNF767PQ75MW2 155 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 ZNF546Q86UE3 836 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 LDLRAD3Q86YD5 345 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 OR10C1Q96KK4 312 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 C2orf50Q96LR7 162 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
C9orf3-202ENST00000297979 PLCE1Q9P212 2302 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms