RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 FAM90A8PA6NJQ4 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A7PA6NKC0 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A22PA8MWA6 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A12PA8MX19 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A5PA8MXJ8 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A23PA8MXZ1 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 K7ESF4 209 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A15PP0C7V4 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A13PP0C7W8 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A14PP0C7W9 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A24PP0C7X0 464 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 PRRX1P54821 245 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 HERVK_113P61574 105 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FAM27BQ5VT28 67 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 POC1AQ8NBT0 407 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 NFAM1Q8NET5 270 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-201ENST00000296302 NPVFQ9HCQ7 196 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 C2CD4DB7Z1M9 353 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 FOXS1O43638 330 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 HIST1H1BP16401 226 aaKnown RBP9.6□□□□□ -0.87
PBRM1-201ENST00000296302 CD82P27701 267 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 SRSF5Q13243 272 aaKnown RBP9.6□□□□□ -0.87
PBRM1-201ENST00000296302 OR4X1Q8NH49 305 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 TAF15Q92804 592 aaKnown RBP eCLIP9.6□□□□□ -0.87
PBRM1-201ENST00000296302 PLA2G3Q9NZ20 509 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 SPAG17Q6Q759 2223 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 A0A0B4J293 547 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 IGKV1-8A0A0C4DH67 115 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 A0A1B0GV90 55 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 EML2O95834 649 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 ACP1P24666 158 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 MPLP40238 635 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 TNFAIP6P98066 277 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-201ENST00000296302 TMEM92Q6UXU6 159 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 SCGB1D4Q6XE38 83 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 RARRES2Q99969 163 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 LHX9Q9NQ69 397 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 GSN-AS1Q9NRJ2 163 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 GLRX2Q9NS18 164 aa9.6□□□□□ -0.87
PBRM1-201ENST00000296302 AMMECR1Q9Y4X0 333 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-201ENST00000296302 TMEM210A6NLX4 147 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 SYNGR1O43759 233 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 GAMTQ14353 236 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 ZNF721Q8TF20 911 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 ABHD14AQ9BUJ0 271 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 NPTNQ9Y639 398 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 LOC102724200A0A096LPH7 203 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-201ENST00000296302 A0A1W2PP11 408 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 C5orf52A6NGY3 159 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 M0QZ24 198 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 ZNF83P51522 516 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 SLC25A33Q9BSK2 321 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 SHISA3A0PJX4 238 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 HOXB1P14653 301 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-201ENST00000296302 BMI1P35226 326 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-201ENST00000296302 A8MWL6 223 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 PRF1P14222 555 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
PBRM1-201ENST00000296302 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-201ENST00000296302 TMEM183AQ8IXX5 376 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 OR8G5Q8NG78 346 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 PARD6GQ9BYG4 376 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-201ENST00000296302 FZR1Q9UM11 496 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 PXMP4Q9Y6I8 212 aa9.59□□□□□ -0.87
PBRM1-201ENST00000296302 MAP1BP46821 2468 aaKnown RBP9.58□□□□□ -0.88
PBRM1-201ENST00000296302 TMEM265A0A087WTH1 108 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 PCP4P48539 62 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 PSMB2P49721 201 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 FGF12P61328 243 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 GAB4Q2WGN9 574 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 DNASE2O00115 360 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-201ENST00000296302 LYZL6O75951 148 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 HPRT1P00492 218 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 AGAP20933 346 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 EFNB1P98172 346 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 TNXAQ16473 311 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 HIKESHIQ53FT3 197 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 WDR74Q6RFH5 385 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-201ENST00000296302 KCNK17Q96T54 332 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 ARFGEF1Q9Y6D6 1849 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 M0R296 226 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 CA2P00918 260 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 ID4P47928 161 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 UCN2Q96RP3 112 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 RPP25Q9BUL9 199 aaKnown RBP9.58□□□□□ -0.88
PBRM1-201ENST00000296302 MRPL18Q9H0U6 180 aaKnown RBP9.58□□□□□ -0.88
PBRM1-201ENST00000296302 IGHV1OR15-9A0A0B4J2B8 117 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 IGHV3-13P01766 116 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 IGHV3-7P01780 117 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 ORM1P02763 201 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 GABRA6Q16445 453 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 LINC01590Q5TEZ4 76 aa9.58□□□□□ -0.88
PBRM1-201ENST00000296302 OR1L8Q8NGR8 309 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms