RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
CCDC116-201ENST00000292779 GTF3C1Q12789 2109 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 NPIPB11E5RHQ5 1161 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 CDIPTO14735 213 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 LYZL6O75951 148 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 WISP2O76076 250 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 OR13C7P0DN81 318 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 SOX8P57073 446 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 UBE2NP61088 152 aaKnown RBP12.75□□□□□ -0.37
CCDC116-201ENST00000292779 FOXC1Q12948 553 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 MRPL49Q13405 166 aaKnown RBP12.75□□□□□ -0.37
CCDC116-201ENST00000292779 C15orf54Q8N8G6 183 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 KCNJ16Q9NPI9 418 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 TRAPPC2LQ9UL33 140 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 PPP1R3CQ9UQK1 317 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 POLDIP2Q9Y2S7 368 aa12.75□□□□□ -0.37
CCDC116-201ENST00000292779 A0A1B0GU03 582 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 A0A1B0GW64 132 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 H3BP45 60 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
CCDC116-201ENST00000292779 J3QW42 95 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 IGKV1-39P01597 117 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 IGKV1D-39P04432 117 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 PAX6P26367 422 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 CCL11P51671 97 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 SPSB3Q6PJ21 355 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 Q6ZRM9 215 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 MOB1BQ7L9L4 216 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 Q8IYB0 196 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 ZNF295-AS1Q8N0V1 137 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
CCDC116-201ENST00000292779 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 TREM2Q9NZC2 230 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 KIAA1324LA8MWY0 1029 aaPredicted RBP12.74□□□□□ -0.37
CCDC116-201ENST00000292779 NXPH2O95156 264 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 PGA5P0DJD9 388 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 DAOP14920 347 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 RPL35P42766 123 aaKnown RBP12.74□□□□□ -0.37
CCDC116-201ENST00000292779 AKR1D1P51857 326 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 RTP5Q14D33 572 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 IGF2-ASQ6U949 168 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 KDF1Q8NAX2 398 aaPredicted RBP12.74□□□□□ -0.37
CCDC116-201ENST00000292779 FDCSPQ8NFU4 85 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 CD300LFQ8TDQ1 290 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 GNPNAT1Q96EK6 184 aaPredicted RBP12.74□□□□□ -0.37
CCDC116-201ENST00000292779 ATP5SQ99766 215 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 CHD8Q9HCK8 2581 aa12.74□□□□□ -0.37
CCDC116-201ENST00000292779 SLC25A6P12236 298 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 SELEP16581 610 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 TGFBR3Q03167 851 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
CCDC116-201ENST00000292779 DSPP15924 2871 aaKnown RBP12.73□□□□□ -0.37
CCDC116-201ENST00000292779 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 H0YL77 283 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 GRPP07492 148 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 WNT2P09544 360 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 FOLR2P14207 255 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 HOXA1P49639 335 aaPredicted RBP12.73□□□□□ -0.37
CCDC116-201ENST00000292779 TMEM267Q0VDI3 215 aaPredicted RBP12.73□□□□□ -0.37
CCDC116-201ENST00000292779 OR1J1Q8NGS3 322 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 ISOC2Q96AB3 205 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 ESRP2Q9H6T0 727 aaKnown RBP12.73□□□□□ -0.37
CCDC116-201ENST00000292779 CLCF1Q9UBD9 225 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 CACNG5Q9UF02 275 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
CCDC116-201ENST00000292779 DIDO1Q9BTC0 2240 aaKnown RBP12.73□□□□□ -0.37
CCDC116-201ENST00000292779 NCOR2Q9Y618 2525 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 RBFOX3A6NFN3 312 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 SH2D1BO14796 132 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 TXNL1O43396 289 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 RAC2P15153 192 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 ZNF16P17020 682 aaPredicted RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 RPL23AP62750 156 aaKnown RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 PSG7Q13046 419 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 ZNF146Q15072 292 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 OR8G1Q15617 311 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 SHEQ5VZ18 495 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 STX12Q86Y82 276 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 TRIB1Q96RU8 372 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 PIEZO2Q9H5I5 2752 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 BSNQ9UPA5 3926 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 PIGBOS1A0A0B4J2F0 54 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 IQCF6A8MYZ5 107 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 IGKV1-5P01602 117 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 CEBPDP49716 269 aaPredicted RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 HABP2Q14520 560 aaPredicted RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 GABRA6Q16445 453 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 OR8G5Q8NG78 346 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 LSM10Q969L4 123 aaKnown RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 SCNM1Q9BWG6 230 aa12.72□□□□□ -0.37
CCDC116-201ENST00000292779 MBNL3Q9NUK0 354 aaKnown RBP12.72□□□□□ -0.37
CCDC116-201ENST00000292779 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.37
CCDC116-201ENST00000292779 WDR1O75083 606 aa12.71□□□□□ -0.37
CCDC116-201ENST00000292779 CNOT4O95628 575 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms