RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 DUX3Q96PT4 197 aa19.82■□□□□ 0.76
U2AF1-201ENST00000291552 S1PR3Q99500 378 aa19.82■□□□□ 0.76
U2AF1-201ENST00000291552 KMT2CQ8NEZ4 4911 aaKnown RBP19.81■□□□□ 0.76
U2AF1-201ENST00000291552 AP4M1O00189 453 aa19.81■□□□□ 0.76
U2AF1-201ENST00000291552 RPLP1P05386 114 aaKnown RBP19.81■□□□□ 0.76
U2AF1-201ENST00000291552 FUT3P21217 361 aa19.81■□□□□ 0.76
U2AF1-201ENST00000291552 MRPL30Q8TCC3 161 aaKnown RBP19.81■□□□□ 0.76
U2AF1-201ENST00000291552 TFAP2CQ92754 450 aa19.81■□□□□ 0.76
U2AF1-201ENST00000291552 FAM46BQ96A09 425 aa19.81■□□□□ 0.76
U2AF1-201ENST00000291552 RAX2Q96IS3 184 aa19.81■□□□□ 0.76
U2AF1-201ENST00000291552 TAF9BQ9HBM6 251 aa19.81■□□□□ 0.76
U2AF1-201ENST00000291552 MBNL3Q9NUK0 354 aaKnown RBP19.81■□□□□ 0.76
U2AF1-201ENST00000291552 CASQ2O14958 399 aaPredicted RBP19.8■□□□□ 0.76
U2AF1-201ENST00000291552 PDCD6O75340 191 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 CA11O75493 328 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 SLC6A1P30531 599 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 MYCNOSP40205 109 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 F2RL1P55085 397 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 CFHR3Q02985 330 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 C6orf141Q5SZD1 244 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 FAM27D1Q5T7N8 215 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 ZNF695Q8IW36 515 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 NKAIN3Q8N8D7 197 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 BPIFB6Q8NFQ5 453 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 UQCC2Q9BRT2 126 aa19.8■□□□□ 0.76
U2AF1-201ENST00000291552 TXNL1O43396 289 aa19.79■□□□□ 0.76
U2AF1-201ENST00000291552 GLAP06280 429 aa19.79■□□□□ 0.76
U2AF1-201ENST00000291552 LSAMPQ13449 338 aa19.79■□□□□ 0.76
U2AF1-201ENST00000291552 TRAT1Q6PIZ9 186 aa19.79■□□□□ 0.76
U2AF1-201ENST00000291552 OR52L2PQ8NGH6 319 aa19.79■□□□□ 0.76
U2AF1-201ENST00000291552 RAB9BQ9NP90 201 aa19.79■□□□□ 0.76
U2AF1-201ENST00000291552 H0YHG0 523 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 LANCL1O43813 399 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 PNLIPRP3Q17RR3 467 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 TEX38Q6PEX7 206 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 UNQ9370/PRO34162Q6UXP9 181 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 ODF3L1Q8IXM7 274 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 RNF152Q8N8N0 203 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 KCNK15Q9H427 330 aa19.78■□□□□ 0.76
U2AF1-201ENST00000291552 MAPK3P27361 379 aaPredicted RBP19.77■□□□□ 0.76
U2AF1-201ENST00000291552 PPP1CCP36873 323 aaKnown RBP19.77■□□□□ 0.76
U2AF1-201ENST00000291552 GPR50Q13585 617 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 DEFB136Q30KP8 78 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 MORN2Q502X0 79 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 OR10K2Q6IF99 312 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 C11orf87Q6NUJ2 197 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 LRRTM1Q86UE6 522 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 OR8H1Q8NGG4 311 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 RASL11BQ9BPW5 248 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 SULT4A1Q9BR01 284 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 GPR61Q9BZJ8 451 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 DCLRE1BQ9H816 532 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 OR2S2Q9NQN1 319 aa19.77■□□□□ 0.76
U2AF1-201ENST00000291552 LSM2Q9Y333 95 aaKnown RBP19.77■□□□□ 0.76
U2AF1-201ENST00000291552 CHATP28329 748 aa19.76■□□□□ 0.75
U2AF1-201ENST00000291552 FOXE3Q13461 319 aa19.76■□□□□ 0.75
U2AF1-201ENST00000291552 STEAP3Q658P3 488 aa19.76■□□□□ 0.75
U2AF1-201ENST00000291552 THRSPQ92748 146 aa19.76■□□□□ 0.75
U2AF1-201ENST00000291552 ABHD14AQ9BUJ0 271 aa19.76■□□□□ 0.75
U2AF1-201ENST00000291552 CCL24O00175 119 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 VSIG8P0DPA2 414 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 GABPB1Q06547 395 aaPredicted RBP19.75■□□□□ 0.75
U2AF1-201ENST00000291552 ACSM3Q53FZ2 586 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 NKAPLQ5M9Q1 402 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 ZNF554Q86TJ5 538 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 DPF1Q92782 380 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 MCRIP2Q9BUT9 160 aaKnown RBP19.75■□□□□ 0.75
U2AF1-201ENST00000291552 MRPL20Q9BYC9 149 aaKnown RBP19.75■□□□□ 0.75
U2AF1-201ENST00000291552 GHRLQ9UBU3 117 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 JPT1Q9UK76 154 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 ERGIC3Q9Y282 383 aa19.75■□□□□ 0.75
U2AF1-201ENST00000291552 IGHG4P01861 327 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 CDK1P06493 297 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 SLC2A2P11168 524 aaPredicted RBP19.74■□□□□ 0.75
U2AF1-201ENST00000291552 SOX6P35712 828 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 HMGN3Q15651 99 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 DEFB121Q5J5C9 76 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 CXorf66Q5JRM2 361 aaPredicted RBP19.74■□□□□ 0.75
U2AF1-201ENST00000291552 C1orf100Q5SVJ3 147 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 RNLSQ5VYX0 342 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 RITA1Q96K30 269 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 CST11Q9H112 138 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 KCNIP1Q9NZI2 227 aa19.74■□□□□ 0.75
U2AF1-201ENST00000291552 IGF1P05019 195 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 ELANEP08246 267 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 MYF6P23409 242 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 CNTFRP26992 372 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 CDX1P47902 265 aaPredicted RBP19.73■□□□□ 0.75
U2AF1-201ENST00000291552 HTD2P86397 168 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 UNC119Q13432 240 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 NABP2Q9BQ15 211 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 NICN1Q9BSH3 213 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 TMED9Q9BVK6 235 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 GON7Q9BXV9 100 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 ZNF580Q9UK33 172 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 NBEAL2Q6ZNJ1 2754 aa19.73■□□□□ 0.75
U2AF1-201ENST00000291552 RRP9O43818 475 aaKnown RBP19.72■□□□□ 0.75
U2AF1-201ENST00000291552 UBBP0CG47 229 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 OR3A3P47888 321 aa19.72■□□□□ 0.75
U2AF1-201ENST00000291552 RPS27AP62979 156 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms