RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GHITMQ9H3K2 345 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 HSF4Q9ULV5 492 aa10.32□□□□□ -0.76
SHPRH-201ENST00000275233 OR4C46A6NHA9 309 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 H3BVH4 76 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 GFRA1P56159 465 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 CD300CQ08708 224 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 Q6ZN92 141 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 C16orf92Q96LL3 132 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 PRR19A6NJB7 356 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 RAB29O14966 203 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 RBM11P57052 281 aaKnown RBP10.31□□□□□ -0.76
SHPRH-201ENST00000275233 NCMAPQ5T1S8 102 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 GPHA2Q96T91 129 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 CCL27Q9Y4X3 112 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 RGS13O14921 159 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 LMX1BO60663 402 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 HBZP02008 142 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 C1QAP02745 245 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 NUBP1P53384 320 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 RIGQ13278 110 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 TEPPQ6URK8 271 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 ZNF519Q8TB69 540 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 ZNFX1Q9P2E3 1918 aaKnown RBP10.31□□□□□ -0.76
SHPRH-201ENST00000275233 B4E171 279 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 TSPAN7P41732 249 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 CEBPEQ15744 281 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 HLA-DRB5Q30154 266 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 SMUG1Q53HV7 270 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 ZNF253O75346 499 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 CRISP2P16562 243 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 IER3P46695 156 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 CD81P60033 236 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 NANOS3P60323 173 aaKnown RBP10.31□□□□□ -0.76
SHPRH-201ENST00000275233 HIST3H3Q16695 136 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 GBGT1Q8N5D6 347 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 ATAD5Q96QE3 1844 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 MIXL1Q9H2W2 232 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 SIRT7Q9NRC8 400 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 TMEM74BQ9NUR3 256 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 IL17BQ9UHF5 180 aa10.31□□□□□ -0.76
SHPRH-201ENST00000275233 MFSD2BA6NFX1 497 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 REG1AP05451 166 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 RCC1P18754 421 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SLC35B1P78383 322 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 TMEM183BQ1AE95 376 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 AWAT1Q58HT5 328 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SLC35E3Q7Z769 313 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SLC25A42Q86VD7 318 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-201ENST00000275233 PILRBQ9UKJ0 227 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 KIR3DL2P43630 455 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 OR11H7Q8NGC8 314 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 GPX7Q96SL4 187 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SF3B6Q9Y3B4 125 aaKnown RBP10.3□□□□□ -0.76
SHPRH-201ENST00000275233 V9GYH0 126 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 ADAM11O75078 769 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 PRSS23O95084 383 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 MBPP02686 304 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SNAI3Q3KNW1 292 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 HSD17B13Q7Z5P4 300 aaPredicted RBP10.3□□□□□ -0.76
SHPRH-201ENST00000275233 OR2T10Q8NGZ9 312 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 POM121Q96HA1 1249 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 NEURL2Q9BR09 285 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 MARVELD1Q9BSK0 173 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 MAP1LC3CQ9BXW4 147 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 A0A1W2PP11 408 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SCTP09683 121 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 KRTCAP3Q53RY4 240 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 WDR73Q6P4I2 378 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SCMH1Q96GD3 660 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 DIRC2Q96SL1 478 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 PIMREGQ9BSJ6 248 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 TRAV20A0A0B4J274 112 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 DHRS7CA6NNS2 312 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 OR2H2O95918 312 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 CRHP06850 196 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 ST6GAL2Q96JF0 529 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 CCL19Q99731 98 aa10.3□□□□□ -0.76
SHPRH-201ENST00000275233 LAMB2P55268 1798 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 FAM106CPP0CH98 169 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 CLPPQ16740 277 aaPredicted RBP10.29□□□□□ -0.76
SHPRH-201ENST00000275233 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.29□□□□□ -0.76
SHPRH-201ENST00000275233 FUT9Q9Y231 359 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 ARL6IP6Q8N6S5 226 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 OR8G5Q8NG78 346 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 DPH3Q96FX2 82 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 PAXXQ9BUH6 204 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 Q9N2K0 584 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 SIPA1L3O60292 1781 aaPredicted RBP10.29□□□□□ -0.76
SHPRH-201ENST00000275233 UBE2L6O14933 153 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 ATP5J2P56134 94 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 ARF6P62330 175 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 ZNF658BQ4V348 819 aaPredicted RBP10.29□□□□□ -0.76
SHPRH-201ENST00000275233 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms