RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ZNF878C9JN71 531 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 M0R1X1 148 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 CD5LO43866 347 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 CLEC3AO75596 197 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF205O95201 554 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 VENTXO95231 258 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 NRASP01111 189 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 KRASP01116 189 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 PMCHP20382 165 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 NTHL1P78549 312 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 PDGFRLQ15198 375 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 SLC18B1Q6NT16 456 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 C1orf147Q96MC9 270 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-201ENST00000274071 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 GNB4Q9HAV0 340 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 POLR1DQ9Y2S0 133 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 CXorf51AA0A1B0GTR3 108 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 NKX2-6A6NCS4 301 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 C2orf72A6NCS6 295 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 ISG15P05161 165 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 CRYGCP07315 174 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 FMODQ06828 376 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 CXorf66Q5JRM2 361 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-201ENST00000274071 LY6G5CQ5SRR4 150 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 ADAT3Q96EY9 351 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-201ENST00000274071 TSPAN32Q96QS1 320 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 CLEC7AQ9BXN2 247 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 UBE2ZQ9H832 354 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF286AQ9HBT8 521 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 DNAJB12Q9NXW2 375 aaKnown RBP7.91□□□□□ -1.14
PDGFC-201ENST00000274071 NOTCH4Q99466 2003 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 TRANK1O15050 2925 aa7.91□□□□□ -1.14
PDGFC-201ENST00000274071 H0YJW9 148 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 MLNRO43193 412 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 SRSF10O75494 262 aaKnown RBP7.9□□□□□ -1.14
PDGFC-201ENST00000274071 S1PR2O95136 353 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 GATA2P23769 480 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-201ENST00000274071 PMCHL1Q16048 86 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 OR4N5Q8IXE1 308 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 OR10P1Q8NGE3 313 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 OR4F5Q8NH21 305 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 C8orf44Q96CB5 159 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM59Q9BXS4 323 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 PPP1R3CQ9UQK1 317 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 UNC80Q8N2C7 3258 aa7.9□□□□□ -1.14
PDGFC-201ENST00000274071 C17orf112F2Z3M2 114 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 CA2P00918 260 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF728P0DKX0 622 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 ERGP11308 486 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 DRD1P21728 446 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 PLA2G5P39877 138 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 PHLDA2Q53GA4 152 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 TMEM177Q53S58 311 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 TMEM215Q68D42 235 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 KCTD18Q6PI47 426 aaPredicted RBP7.9□□□□□ -1.15
PDGFC-201ENST00000274071 OR10V1Q8NGI7 309 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 ST6GALNAC6Q969X2 333 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 SPSB1Q96BD6 273 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 KLHDC7BQ96G42 594 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 RCHY1Q96PM5 261 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 FNDC4Q9H6D8 234 aaPredicted RBP7.9□□□□□ -1.15
PDGFC-201ENST00000274071 WNT6Q9Y6F9 365 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 REV3LO60673 3130 aa7.9□□□□□ -1.15
PDGFC-201ENST00000274071 FUT6P51993 359 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 RRADP55042 308 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 RAB31Q13636 194 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ZNF77Q15935 545 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 ABCA11PQ4W5N1 156 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 COLCA1Q6ZS62 124 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 FAM58AQ8N1B3 248 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 LRRC25Q8N386 305 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 GATAD1Q8WUU5 269 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 OR5P3Q8WZ94 311 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 LHX4Q969G2 390 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 GMPPAQ96IJ6 420 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 R4GMQ9 66 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 PHF3Q92576 2039 aaKnown RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 MPDZO75970 2070 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 IGKV1-8A0A0C4DH67 115 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 FAM231BA6NCW3 169 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 C1QTNF9BB2RNN3 333 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 RENP00797 406 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 REG1AP05451 166 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 FRMD6-AS1P0C7T7 363 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 C1QTNF9P0C862 333 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 MDH2P40926 338 aaKnown RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 PSMB3P49720 205 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 POLR2LP62875 67 aaKnown RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 CCDC144NLQ6NUI1 221 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 FAM19A2Q8N3H0 131 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 OR4A5Q8NH83 315 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 OR2AE1Q8NHA4 323 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 SLC25A40Q8TBP6 338 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 CYB5D2Q8WUJ1 264 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 APOOQ9BUR5 198 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 SSBP4Q9BWG4 385 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 KIAA1324LA8MWY0 1029 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-201ENST00000274071 FCN1O00602 326 aa7.89□□□□□ -1.15
PDGFC-201ENST00000274071 PLPP3O14495 311 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms