RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ABHD14BQ96IU4 210 aa11.81□□□□□ -0.52
NPC1-201ENST00000269228 SNX22Q96L94 193 aa11.81□□□□□ -0.52
NPC1-201ENST00000269228 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
NPC1-201ENST00000269228 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
NPC1-201ENST00000269228 KCNMB2Q9Y691 235 aa11.81□□□□□ -0.52
NPC1-201ENST00000269228 AKAP6Q13023 2319 aa11.81□□□□□ -0.52
NPC1-201ENST00000269228 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 DHRS7CA6NNS2 312 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 INHBBP09529 407 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 CPN1P15169 458 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 CD200P41217 278 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 CNN1P51911 297 aaKnown RBP11.8□□□□□ -0.52
NPC1-201ENST00000269228 MIDNQ504T8 468 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 OR10Z1Q8NGY1 313 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 DPF1Q92782 380 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 CECR9P0C854 216 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 ATP5J2P56134 94 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 GPR137Q96N19 417 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 VSIG4Q9Y279 399 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 A1L4Q6 167 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 RAB29O14966 203 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 NEURL1O76050 574 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 OR2C1O95371 312 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 KLK2P20151 261 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 ZNF260Q3ZCT1 412 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 OR4F17Q8NGA8 305 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 OR5B3Q8NH48 314 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 FAM131CQ96AQ9 280 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 RHOFQ9HBH0 211 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 DLL3Q9NYJ7 618 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 ARG1P05089 322 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 CLDN18P56856 261 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 LYZP61626 148 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 ZNF596Q8TC21 504 aa11.8□□□□□ -0.52
NPC1-201ENST00000269228 SF3B6Q9Y3B4 125 aaKnown RBP11.8□□□□□ -0.52
NPC1-201ENST00000269228 TRAV20A0A0B4J274 112 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 ADRB1P08588 477 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 LHX2P50458 406 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 DYNLT3P51808 116 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 OR5I1Q13606 314 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 CLEC12BQ2HXU8 276 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 RPL7L1Q6DKI1 246 aaKnown RBP11.79□□□□□ -0.52
NPC1-201ENST00000269228 CCDC144NLQ6NUI1 221 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
NPC1-201ENST00000269228 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 FBP1P09467 338 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 BMI1P35226 326 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 NPBWR2P48146 333 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 FDX2Q6P4F2 183 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 NUDT16L1Q9BRJ7 211 aaKnown RBP11.79□□□□□ -0.52
NPC1-201ENST00000269228 FOXD3Q9UJU5 478 aaPredicted RBP11.79□□□□□ -0.52
NPC1-201ENST00000269228 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 PINLYPA6NC86 204 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 IL24Q13007 206 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 SPNS3Q6ZMD2 512 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 SLC25A38Q96DW6 304 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 MS4A7Q9GZW8 240 aaPredicted RBP11.79□□□□□ -0.52
NPC1-201ENST00000269228 MRPS18CQ9Y3D5 142 aaKnown RBP11.79□□□□□ -0.52
NPC1-201ENST00000269228 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 DAOP14920 347 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 UNQ9370/PRO34162Q6UXP9 181 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 LRRC75AQ8NAA5 344 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
NPC1-201ENST00000269228 ATP6V1FQ16864 119 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 BLNKQ8WV28 456 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 ODAMA1E959 279 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 ZNF320A2RRD8 509 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 GNG7O60262 68 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 GLRXP35754 106 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 ZNF154Q13106 437 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 LY6DQ14210 128 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 ZNF439Q8NDP4 499 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 V9GYS6 101 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
NPC1-201ENST00000269228 NCR3LG1Q68D85 454 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 TMEM88Q6PEY1 159 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 CXorf58Q96LI9 332 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
NPC1-201ENST00000269228 ECSCRQ19T08 205 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 AARDQ4LEZ3 155 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 BTNL8Q6UX41 500 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 SLC45A2Q9UMX9 530 aa11.78□□□□□ -0.52
NPC1-201ENST00000269228 PLXNA3P51805 1871 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A10PA6NDY2 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A18PA6NE21 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A16PA6NEW6 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A20PA6NIJ5 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A8PA6NJQ4 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A7PA6NKC0 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A22PA8MWA6 464 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms