RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 POLR3KQ9Y2Y1 108 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NKX2-6A6NCS4 301 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNHIT1O43257 154 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 HSPA12AO43301 675 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SSSCA1O60232 199 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PITX3O75364 302 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CYB5R3P00387 301 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PATE4P0C8F1 98 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 WIPI1Q5MNZ9 446 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SLC25A26Q70HW3 274 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CMTM1Q8IZ96 169 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LPAR2Q9HBW0 351 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GNG13Q9P2W3 67 aa13.68□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TUBG1P23258 451 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ARL6IP1Q15041 203 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PGAM5Q96HS1 289 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 M0QZK8 103 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GGCTO75223 188 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 MSR1P21757 451 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DYNLT3P51808 116 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 RAC1P63000 192 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NHLH1Q02575 133 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ENDOGQ14249 297 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 BATFQ16520 125 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 COA6Q5JTJ3 125 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FAM90A2PQ658T7 463 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 RTL6Q6ICC9 239 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LOC102725191A0A1B0GVB3 256 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 DHHO43323 396 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ANGPTL7O43827 346 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CXCL13O43927 109 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NXPH3O95157 252 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CEACAM1P13688 526 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OR5I1Q13606 314 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NECAP1Q8NC96 275 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM18Q96B42 140 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 RBMXL1Q96E39 390 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 C11orf1Q9H5F2 150 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PLEK2Q9NYT0 353 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LRFN1Q9P244 771 aa13.67□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZFP92A6NM28 416 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SIAH2O43255 324 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OPN1MWP04001 364 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SERPINA7P05543 415 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OPN1MW2P0DN77 364 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 OPN1MW3P0DN78 364 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NKX2-1P43699 371 aaPredicted RBP13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CLEC12BQ2HXU8 276 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SAPCD1Q5SSQ6 148 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM37Q8WXS4 190 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 Q96M66 194 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LOC102723971A0A1B0GUV8 181 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 BRS3P32247 399 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CCL11P51671 97 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 B3GALT5-AS1P59052 145 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GNB2P62879 340 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PRSS8Q16651 343 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 MPV17LQ2QL34 196 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 NABP1Q96AH0 204 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 SGCZQ96LD1 299 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ALKBH3Q96Q83 286 aaPredicted RBP13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LAMP3Q9UQV4 416 aa13.66□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FREM1Q5H8C1 2179 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 KIR2DL5BA0A0G2JN68 375 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 KIR2DL5BA0A0G2JPC4 375 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 C21orf140B9A014 251 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 IGHV3-9P01782 118 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CELA3AP09093 270 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 WNT5AP41221 380 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CYB561P49447 251 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CARD18P57730 90 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TLE4Q04727 773 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FOXC1Q12948 553 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CLN3Q13286 438 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 CXorf66Q5JRM2 361 aaPredicted RBP13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ODF3L1Q8IXM7 274 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 KIR2DL5AQ8N109 375 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 FKBP11Q9NYL4 201 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 PIGLQ9Y2B2 252 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNF732B4DXR9 585 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNF133P52736 654 aaPredicted RBP13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 VAMP2P63027 116 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 KCNMB1Q16558 191 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 GJC3Q8NFK1 279 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 ZNF845Q96IR2 970 aaPredicted RBP13.65□□□□□ -0.22
MAP1LC3B-201ENST00000268607 LYRM2Q9NU23 88 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms