RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SLC35E4Q6ICL7 350 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 SGPP2Q8IWX5 399 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 ERGIC1Q969X5 290 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 CABLES2Q9BTV7 478 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 RSRP1Q9BUV0 290 aa17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 SEBOXQ9HB31 216 aaPredicted RBP17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 MBNL3Q9NUK0 354 aaKnown RBP17.25■□□□□ 0.35
LYSMD2-201ENST00000267838 C17orf100A8MU93 164 aa17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 NUPL2O15504 423 aaKnown RBP17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 TUSC2O75896 110 aa17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 RRNAD1Q96FB5 475 aaKnown RBP17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 KIRREL1Q96J84 757 aa17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 RNF7Q9UBF6 113 aa17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 USP24Q9UPU5 2620 aa17.24■□□□□ 0.35
LYSMD2-201ENST00000267838 IGKV1D-17A0A075B6S4 117 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 ADAP1O75689 374 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 IFNA2P01563 188 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 CD55P08174 381 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 TLE1Q04724 770 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 OR10J5Q8NHC4 309 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 Q8TCH9 128 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 NEUROG1Q92886 237 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 SAT2Q96F10 170 aaPredicted RBP17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 PRR13Q9NZ81 148 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 IGHV3OR15-7A0A075B7D8 119 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 FLI1Q01543 452 aaPredicted RBP17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 AESQ08117 197 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 HMGN3Q15651 99 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 OR11L1Q8NGX0 322 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 COQ2Q96H96 371 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 CNTNAP3BQ96NU0 1288 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 SLC2A9Q9NRM0 540 aa17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 CARHSP1Q9Y2V2 147 aaKnown RBP17.23■□□□□ 0.35
LYSMD2-201ENST00000267838 IL15RAQ13261 267 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 PHLDA2Q53GA4 152 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 C10orf91Q5T1B1 145 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 TMED6Q8WW62 240 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 RTN4IP1Q8WWV3 396 aaPredicted RBP17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 IL1F10Q8WWZ1 152 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 CNTNAP3Q9BZ76 1288 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 NAA60Q9H7X0 242 aa17.22■□□□□ 0.35
LYSMD2-201ENST00000267838 FAM74A7A6NL05 159 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 NPIPB11E5RHQ5 1161 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 TNFRSF1AP19438 455 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 CD80P33681 288 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 GABRA2P47869 451 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 CCL8P80075 99 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 TESK1Q15569 626 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 FAM74A3Q4VXF1 159 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 H1FOOQ8IZA3 346 aaPredicted RBP17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 PRR18Q8N4B5 295 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 FAM222BQ8WU58 562 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 SLC5A7Q9GZV3 580 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 TAF9BQ9HBM6 251 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 KCNIP1Q9NZI2 227 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 OR5AC2Q9NZP5 309 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 LPAR3Q9UBY5 353 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 PPP1R3CQ9UQK1 317 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 RNF115Q9Y4L5 304 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 COL6A6A6NMZ7 2263 aa17.21■□□□□ 0.35
LYSMD2-201ENST00000267838 ZNF737O75373 536 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 CYB5R3P00387 301 aaPredicted RBP17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 GNRHRP30968 328 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 APOBEC3AP31941 199 aaPredicted RBP17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 TFF3Q07654 80 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 PJVKQ0ZLH3 352 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 RAB32Q13637 225 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 KRBOX4Q5JUW0 171 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 FAM201AQ5SY85 155 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 SPAG16Q8N0X2 631 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 ZNF565Q8N9K5 539 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 CCDC71LQ8N9Z2 235 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 SECTM1Q8WVN6 248 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 OR10C1Q96KK4 312 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 KCNIP3Q9Y2W7 256 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 ICE1Q9Y2F5 2266 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 CACNA1BQ00975 2339 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 IGKV1D-13A0A0B4J2D9 117 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 MSGN1A6NI15 193 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 KCNAB3O43448 404 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 PLAUP00749 431 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 IGKV1-13P0DP09 117 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 PAX5Q02548 391 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 SMCO1Q147U7 214 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 ZCCHC24Q8N2G6 241 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 GALNT14Q96FL9 552 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 SNX22Q96L94 193 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 OR1A1Q9P1Q5 309 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 OR2W1Q9Y3N9 320 aa17.2■□□□□ 0.34
LYSMD2-201ENST00000267838 OOEPA6NGQ2 149 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 ZNF705EA8MWA4 302 aaPredicted RBP17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 SIAH2O43255 324 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 H2AFB1P0C5Y9 115 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 FAM157CP0CG43 387 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 IRF2P14316 349 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 S100A10P60903 97 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 FAM185AQ8N0U4 392 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 PPP1R35Q8TAP8 253 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 EGLN1Q9GZT9 426 aa17.19■□□□□ 0.34
LYSMD2-201ENST00000267838 F8W036 122 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms