RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SLC25A10Q9UBX3 287 aaPredicted RBP13.32□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A10PA6NDY2 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A18PA6NE21 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A16PA6NEW6 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A20PA6NIJ5 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A7PA6NKC0 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A22PA8MWA6 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A12PA8MX19 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A5PA8MXJ8 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A23PA8MXZ1 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 CLDN14O95500 239 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A15PP0C7V4 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A13PP0C7W8 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A14PP0C7W9 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 FAM90A24PP0C7X0 464 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 NTF3P20783 257 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 BCL2L2Q92843 193 aaPredicted RBP13.31□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF646O15015 1829 aaPredicted RBP13.31□□□□□ -0.28
TIMP3-201ENST00000266085 PLAC9Q5JTB6 97 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 ZDHHC11Q9H8X9 412 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 PRNDQ9UKY0 176 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 MMP24Q9Y5R2 645 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 DUXBA0A1W2PPF3 345 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF737O75373 536 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 PSG2P11465 335 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 SULT1A1P50225 295 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 TNFSF10P50591 281 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 ZNF154Q13106 437 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 LPAR3Q9UBY5 353 aa13.31□□□□□ -0.28
TIMP3-201ENST00000266085 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
TIMP3-201ENST00000266085 FAM219AQ8IW50 185 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 MARS2Q96GW9 593 aaKnown RBP13.3□□□□□ -0.28
TIMP3-201ENST00000266085 SCNM1Q9BWG6 230 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 G6PCP35575 357 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 PAX5Q02548 391 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 TMEM241Q24JQ0 296 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 IGSF11Q5DX21 431 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 CCL13Q99616 98 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 LOC102723996A0A087X1L8 192 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 CLDN34H7C241 214 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 TOX4O94842 621 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 HSD17B13Q7Z5P4 300 aaPredicted RBP13.3□□□□□ -0.28
TIMP3-201ENST00000266085 OR8G5Q8NG78 346 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 PKIBQ9C010 78 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 LPAR2Q9HBW0 351 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 NIT2Q9NQR4 276 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 POMT1Q9Y6A1 747 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 S100A8P05109 93 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 ADRA2AP08913 450 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 MPV17P39210 176 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.28
TIMP3-201ENST00000266085 C19orf57Q0VDD7 668 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 OR1L4Q8NGR5 311 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 CISD1Q9NZ45 108 aaKnown RBP13.3□□□□□ -0.28
TIMP3-201ENST00000266085 DOK5Q9P104 306 aa13.3□□□□□ -0.28
TIMP3-201ENST00000266085 OR2H2O95918 312 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 MBPP02686 304 aaPredicted RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 VSIG10L2P0DP72 767 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 CD59P13987 128 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 ORM2P19652 201 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 TMEM50BP56557 158 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 CLRN3Q8NCR9 226 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 CSRP1P21291 193 aaKnown RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 FGF8P55075 233 aaPredicted RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 UBE2V2Q15819 145 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 C17orf82Q86X59 251 aaPredicted RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 OR52L2PQ8NGH6 319 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 KLF14Q8TD94 323 aaPredicted RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 GPR132Q9UNW8 380 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 ABCA1O95477 2261 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 TCF20Q9UGU0 1960 aaKnown RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 A0A1W2PPE3 182 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 LRRC3CA6NJW4 275 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 NTN3O00634 580 aaPredicted RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 NUDT16L1Q9BRJ7 211 aaKnown RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 RCC2Q9P258 522 aaKnown RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
TIMP3-201ENST00000266085 FNDC1Q4ZHG4 1894 aaPredicted RBP13.29□□□□□ -0.28
TIMP3-201ENST00000266085 IGKV1D-43A0A0B4J1Z2 117 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 SERTM2A0A1B0GWG4 89 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 KLF7O75840 302 aaPredicted RBP13.28□□□□□ -0.28
TIMP3-201ENST00000266085 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
TIMP3-201ENST00000266085 GPR6P46095 362 aaPredicted RBP13.28□□□□□ -0.28
TIMP3-201ENST00000266085 ZNRF4Q8WWF5 429 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 HSF4Q9ULV5 492 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 CDRT15L2A8MXV6 281 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 F2RL2O00254 374 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 RGS13O14921 159 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 RAB29O14966 203 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 HBZP02008 142 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 SCTP09683 121 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 ABHD17AQ96GS6 310 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 GP6Q9HCN6 339 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 FAM87AP0C7U9 286 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 SPP1P10451 314 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 Q6ZT83 130 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 SFXN3Q9BWM7 321 aa13.28□□□□□ -0.28
TIMP3-201ENST00000266085 NPY1RP25929 384 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms