RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 RPL23AP62750 156 aaKnown RBP7.67□□□□□ -1.18
VPS41-201ENST00000265745 RCN1Q15293 331 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 CT45A1Q5HYN5 189 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 OGFRL1Q5TC84 451 aaPredicted RBP7.67□□□□□ -1.18
VPS41-201ENST00000265745 STEAP3Q658P3 488 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 AWAT2Q6E213 333 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 SIGIRRQ6IA17 410 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 SLC25A48Q6ZT89 311 aaKnown RBP7.67□□□□□ -1.18
VPS41-201ENST00000265745 AHSA2Q719I0 299 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 OR2W3Q7Z3T1 314 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 SLC35E3Q7Z769 313 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 TGIF2LXQ8IUE1 241 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 IZUMO1Q8IYV9 350 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 C8orf59Q8N0T1 100 aaPredicted RBP7.67□□□□□ -1.18
VPS41-201ENST00000265745 NANOGP1Q8N7R0 232 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 LINC00482Q8N8I6 264 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 ZNF439Q8NDP4 499 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 OR2T10Q8NGZ9 312 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 CT45A3Q8NHU0 189 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 RTN4IP1Q8WWV3 396 aaPredicted RBP7.67□□□□□ -1.18
VPS41-201ENST00000265745 SELENOIQ9C0D9 397 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 ABCG5Q9H222 651 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 BANF2Q9H503 90 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 FKBP14Q9NWM8 211 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 ETAA1Q9NY74 926 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 GNG12Q9UBI6 72 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 LINC00527Q9UJ94 153 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 TRAPPC2LQ9UL33 140 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 PEX16Q9Y5Y5 336 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 PLXNB1O43157 2135 aa7.67□□□□□ -1.18
VPS41-201ENST00000265745 NCBP2LA6PVI3 153 aaKnown RBP7.66□□□□□ -1.18
VPS41-201ENST00000265745 ZNF736B4DX44 427 aaPredicted RBP7.66□□□□□ -1.18
VPS41-201ENST00000265745 CASQ2O14958 399 aaPredicted RBP7.66□□□□□ -1.18
VPS41-201ENST00000265745 SLC31A2O15432 143 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 CA11O75493 328 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 SC5DO75845 299 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 HBZP02008 142 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 MGMTP16455 207 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 RCC1P18754 421 aaPredicted RBP7.66□□□□□ -1.18
VPS41-201ENST00000265745 IL3RAP26951 378 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 SLC6A1P30531 599 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 VHLP40337 213 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 GPR12P47775 334 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 THBS3P49746 956 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 MECP2P51608 486 aaKnown RBP7.66□□□□□ -1.18
VPS41-201ENST00000265745 ZNF137PP52743 207 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 WNT4P56705 351 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 EGFEM1PQ0D2K5 195 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 TMEM30BQ3MIR4 351 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 C6orf183Q5T699 404 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 UNQ9370/PRO34162Q6UXP9 181 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 ETV3LQ6ZN32 361 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 C18orf65Q6ZTR6 163 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 FOXRED2Q8IWF2 684 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 STPG2Q8N412 459 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 COMMD1Q8N668 190 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 Q8N9W7 124 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 BPIFB6Q8NFQ5 453 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 OR8H1Q8NGG4 311 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 OR4K15Q8NH41 348 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 OR1L1Q8NH94 360 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 TFAP2CQ92754 450 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 CYYR1Q96J86 154 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 UQCC2Q9BRT2 126 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 RAB9BQ9NP90 201 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 LIN7CQ9NUP9 197 aaKnown RBP7.66□□□□□ -1.18
VPS41-201ENST00000265745 GHRLQ9UBU3 117 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 ERGIC3Q9Y282 383 aa7.66□□□□□ -1.18
VPS41-201ENST00000265745 K7EIL1 84 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 AP4M1O00189 453 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 MYL12BO14950 172 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 CRTAPO75718 401 aaPredicted RBP7.65□□□□□ -1.18
VPS41-201ENST00000265745 MPIG6BO95866 241 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 MOSP00540 346 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 MAPK3P27361 379 aaPredicted RBP7.65□□□□□ -1.18
VPS41-201ENST00000265745 GP2P55259 537 aaKnown RBP7.65□□□□□ -1.18
VPS41-201ENST00000265745 SLC35B1P78383 322 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 INSL4Q14641 139 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 PNLIPRP3Q17RR3 467 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 RNLSQ5VYX0 342 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 TEX38Q6PEX7 206 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 TRAT1Q6PIZ9 186 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 ZNF554Q86TJ5 538 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 PRR18Q8N4B5 295 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 NKAIN3Q8N8D7 197 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 OR51D1Q8NGF3 324 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 OR10V1Q8NGI7 309 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 THRSPQ92748 146 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 RBMXL1Q96E39 390 aaKnown RBP7.65□□□□□ -1.18
VPS41-201ENST00000265745 S1PR3Q99500 378 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 P2RX4Q99571 388 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 TAF9BQ9HBM6 251 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 OR2S2Q9NQN1 319 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 MBNL3Q9NUK0 354 aaKnown RBP7.65□□□□□ -1.18
VPS41-201ENST00000265745 AP5S1Q9NUS5 200 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 U3KQE9 123 aa7.65□□□□□ -1.18
VPS41-201ENST00000265745 UBE2QL1A1L167 161 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 H0YHG0 523 aa7.64□□□□□ -1.19
VPS41-201ENST00000265745 TXNL1O43396 289 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms