RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 HEXA-AS1Q9H8Q6 139 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 DOCK6Q96HP0 2047 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FLVCR1-AS1Q8TAF5 88 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 SEC11CQ9BY50 192 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 PRDM14Q9GZV8 571 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A8PA6NJQ4 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A22PA8MWA6 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 BRS3P32247 399 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 SSMEM1Q8WWF3 244 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 ANKRD36A6QL64 1941 aa12.09□□□□□ -0.47
CDH3-201ENST00000264012 LRRC3CA6NJW4 275 aa12.08□□□□□ -0.47
CDH3-201ENST00000264012 SMIM6P0DI80 62 aa12.08□□□□□ -0.47
CDH3-201ENST00000264012 COX5BP10606 129 aa12.08□□□□□ -0.47
CDH3-201ENST00000264012 SFTPCP11686 197 aa12.08□□□□□ -0.47
CDH3-201ENST00000264012 TUSC1Q2TAM9 212 aa12.08□□□□□ -0.47
CDH3-201ENST00000264012 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
CDH3-201ENST00000264012 FAM162BQ5T6X4 162 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 ZNF66Q6ZN08 573 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 CCL13Q99616 98 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 SHISA3A0PJX4 238 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 HBZP02008 142 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 SRP14P37108 136 aaKnown RBP12.08□□□□□ -0.48
CDH3-201ENST00000264012 LYZP61626 148 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 TMEM54Q969K7 222 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 TRPM7Q96QT4 1865 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 GDF9O60383 454 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 GALR1P47211 349 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 TMEM255AQ5JRV8 349 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 ZNRF4Q8WWF5 429 aa12.08□□□□□ -0.48
CDH3-201ENST00000264012 ZMAT5Q9UDW3 170 aaKnown RBP12.08□□□□□ -0.48
CDH3-201ENST00000264012 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 OR8G5Q8NG78 346 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 TIMP4Q99727 224 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 PKIBQ9C010 78 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 SCN5AQ14524 2016 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 CTSSP25774 331 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 ZNF362Q5T0B9 420 aaPredicted RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 NFAM1Q8NET5 270 aaPredicted RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 TECRQ9NZ01 308 aaKnown RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 HSF4Q9ULV5 492 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 NEUROG3Q9Y4Z2 214 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 TRAPPC1Q9Y5R8 145 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 NYNRINQ9P2P1 1898 aaKnown RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 SH2D7A6NKC9 451 aaPredicted RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 SEC11BP0C7V7 166 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 FAM78BQ5VT40 261 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 LINC00114Q6XXX2 140 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 SIGLEC12Q96PQ1 595 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 CXCL2P19875 107 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 NPY1RP25929 384 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 MPV17P39210 176 aa12.07□□□□□ -0.48
CDH3-201ENST00000264012 MARS2Q96GW9 593 aaKnown RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
CDH3-201ENST00000264012 KCNAB3O43448 404 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 ADAM11O75078 769 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 GYPAP02724 150 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 REG1BP48304 166 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 FDCSPQ8NFU4 85 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 OR1B1Q8NGR6 318 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 Q96M66 194 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 DIRC2Q96SL1 478 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 TMEM167BQ9NRX6 74 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 RAB29O14966 203 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 PAX6P26367 422 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
CDH3-201ENST00000264012 ATP6V0CP27449 155 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 ZNF658BQ4V348 819 aaPredicted RBP12.06□□□□□ -0.48
CDH3-201ENST00000264012 MRPL14Q6P1L8 145 aaKnown RBP12.06□□□□□ -0.48
CDH3-201ENST00000264012 SPNS3Q6ZMD2 512 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 IMMP1LQ96LU5 166 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 RNF2Q99496 336 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 ABHD14AQ9BUJ0 271 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 WDR61Q9GZS3 305 aaKnown RBP12.06□□□□□ -0.48
CDH3-201ENST00000264012 ZNF703Q9H7S9 590 aaPredicted RBP12.06□□□□□ -0.48
CDH3-201ENST00000264012 MANBALQ9NQG1 85 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 DLL3Q9NYJ7 618 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 C1RLQ9NZP8 487 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 SPINK4O60575 86 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 HSBP1O75506 76 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 NMBP08949 121 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms