RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 MAGT1Q9H0U3 335 aa14.02□□□□□ -0.16
CTCF-201ENST00000264010 WSB1Q9Y6I7 421 aa14.02□□□□□ -0.16
CTCF-201ENST00000264010 SNCAP37840 140 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 FGF12P61328 243 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 A0A1W2PR80 420 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 ZNHIT1O43257 154 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 IGLV3-1P01715 115 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 HTD2P86397 168 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 AADACL3Q5VUY0 350 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 DHRS11Q6UWP2 260 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 NUFIP2Q7Z417 695 aaKnown RBP14.02□□□□□ -0.17
CTCF-201ENST00000264010 WBP1Q96G27 269 aa14.02□□□□□ -0.17
CTCF-201ENST00000264010 C3orf85A0A1B0GTC6 90 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 SFTPCP11686 197 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 RAC2P15153 192 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 GCNT2Q8N0V5 402 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 GLRX2Q9NS18 164 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 METTL1Q9UBP6 276 aaKnown RBP14.01□□□□□ -0.17
CTCF-201ENST00000264010 PRSS50Q9UI38 385 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 H3BP45 60 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 SAXO1Q8IYX7 474 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 POC1AQ8NBT0 407 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 ANAPC10Q9UM13 185 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 TIMM8AO60220 97 aaPredicted RBP14.01□□□□□ -0.17
CTCF-201ENST00000264010 PGA5P0DJD9 388 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 CDX1P47902 265 aaPredicted RBP14.01□□□□□ -0.17
CTCF-201ENST00000264010 MDP1Q86V88 176 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 REPIN1Q9BWE0 567 aaKnown RBP14.01□□□□□ -0.17
CTCF-201ENST00000264010 FBXL17Q9UF56 701 aa14.01□□□□□ -0.17
CTCF-201ENST00000264010 LRP5LA4QPB2 252 aa14□□□□□ -0.17
CTCF-201ENST00000264010 SIRPB1O00241 398 aa14□□□□□ -0.17
CTCF-201ENST00000264010 CST7O76096 145 aa14□□□□□ -0.17
CTCF-201ENST00000264010 NPBWR2P48146 333 aa14□□□□□ -0.17
CTCF-201ENST00000264010 SOX8P57073 446 aa14□□□□□ -0.17
CTCF-201ENST00000264010 Q8IYB0 196 aa14□□□□□ -0.17
CTCF-201ENST00000264010 AQP10Q96PS8 301 aa14□□□□□ -0.17
CTCF-201ENST00000264010 SELENOKQ9Y6D0 94 aa14□□□□□ -0.17
CTCF-201ENST00000264010 SH2D1BO14796 132 aa14□□□□□ -0.17
CTCF-201ENST00000264010 MPPED1O15442 326 aa14□□□□□ -0.17
CTCF-201ENST00000264010 DHRS7BQ6IAN0 325 aaPredicted RBP14□□□□□ -0.17
CTCF-201ENST00000264010 ADAMTS9Q9P2N4 1935 aa14□□□□□ -0.17
CTCF-201ENST00000264010 TRDCB7Z8K6 153 aa14□□□□□ -0.17
CTCF-201ENST00000264010 IL2RGP31785 369 aa14□□□□□ -0.17
CTCF-201ENST00000264010 HGFACQ04756 655 aa14□□□□□ -0.17
CTCF-201ENST00000264010 MZT1Q08AG7 82 aa14□□□□□ -0.17
CTCF-201ENST00000264010 ZNF266Q14584 549 aa14□□□□□ -0.17
CTCF-201ENST00000264010 ATP1A1-AS1Q5TC04 95 aa14□□□□□ -0.17
CTCF-201ENST00000264010 DPPA3Q6W0C5 159 aa14□□□□□ -0.17
CTCF-201ENST00000264010 LYZL2Q7Z4W2 148 aa14□□□□□ -0.17
CTCF-201ENST00000264010 CALHM1Q8IU99 346 aa14□□□□□ -0.17
CTCF-201ENST00000264010 ZADH2Q8N4Q0 377 aa14□□□□□ -0.17
CTCF-201ENST00000264010 OR51H1Q8NH63 302 aa14□□□□□ -0.17
CTCF-201ENST00000264010 SMIM7Q9BQ49 75 aa14□□□□□ -0.17
CTCF-201ENST00000264010 RCL1Q9Y2P8 373 aaKnown RBP14□□□□□ -0.17
CTCF-201ENST00000264010 LIPGQ9Y5X9 500 aa14□□□□□ -0.17
CTCF-201ENST00000264010 COL5A1P20908 1838 aaPredicted RBP14□□□□□ -0.17
CTCF-201ENST00000264010 NGFP01138 241 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 OR3A1P47881 315 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 PPP1CBP62140 327 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 SUMO1P63165 101 aaKnown RBP13.99□□□□□ -0.17
CTCF-201ENST00000264010 DEFB109BQ30KR1 87 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 MOB3AQ96BX8 217 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 GMPPAQ96IJ6 420 aaPredicted RBP13.99□□□□□ -0.17
CTCF-201ENST00000264010 CELSR3Q9NYQ7 3312 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 IGKV1-27A0A075B6S5 117 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 IGKV1D-8A0A087WSZ0 117 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 MSTNO14793 375 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 TFPI2P48307 235 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 TMEM33P57088 247 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 Q6ZN92 141 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 GTF3AQ92664 365 aaKnown RBP13.99□□□□□ -0.17
CTCF-201ENST00000264010 SAT2Q96F10 170 aaPredicted RBP13.99□□□□□ -0.17
CTCF-201ENST00000264010 C14orf144Q96I85 54 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 AUP1Q9Y679 476 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 EML5Q05BV3 1969 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 J3QT63 122 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 IL13RA2Q14627 380 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 PYY3Q5JQD4 70 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 TMEM42Q69YG0 159 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 OR1K1Q8NGR3 316 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 TBX15Q96SF7 602 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 REG4Q9BYZ8 158 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 ARV1Q9H2C2 271 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 RNF122Q9H9V4 155 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 GCM1Q9NP62 436 aa13.99□□□□□ -0.17
CTCF-201ENST00000264010 IGHV3-64DA0A0J9YX35 117 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 SPINK4O60575 86 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 LYZL6O75951 148 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 SELENOVP59797 346 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 GFI1BQ5VTD9 330 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 KCNIP4Q6PIL6 250 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 FBLL1A6NHQ2 334 aaKnown RBP13.98□□□□□ -0.17
CTCF-201ENST00000264010 CEACAM18A8MTB9 384 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 NTF4P34130 210 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 DLK1P80370 383 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 LINC00596Q86U02 117 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 C22orf15Q8WYQ4 148 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 SPAARA0A1B0GVQ0 90 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms