RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 RAB9BQ9NP90 201 aa18.71■□□□□ 0.59
UFD1-201ENST00000263202 ZNF221Q9UK13 617 aa18.71■□□□□ 0.59
UFD1-201ENST00000263202 IGHV3-43A0A0B4J1X8 118 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 IGHV3-43DP0DP04 118 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 LTC4SQ16873 150 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 LDLRAD3Q86YD5 345 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 ZFAND1Q8TCF1 268 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 PARP12Q9H0J9 701 aaKnown RBP18.7■□□□□ 0.58
UFD1-201ENST00000263202 GHITMQ9H3K2 345 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 CELSR2Q9HCU4 2923 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 LOXL3P58215 753 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 GNB2P62879 340 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 C10orf105Q8TEF2 133 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 NINJ1Q92982 152 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 ZNF714Q96N38 554 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 SEC22CQ9BRL7 303 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 GAL3ST2Q9H3Q3 398 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 JPT1Q9UK76 154 aa18.7■□□□□ 0.58
UFD1-201ENST00000263202 NDUFS8O00217 210 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 IGHV2-5P01817 119 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 CTSDP07339 412 aaPredicted RBP18.69■□□□□ 0.58
UFD1-201ENST00000263202 OR4E1P0C645 316 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 CCL3L1P16619 93 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 PPP1CCP36873 323 aaKnown RBP18.69■□□□□ 0.58
UFD1-201ENST00000263202 METTL11BQ5VVY1 283 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 CLEC2AQ6UVW9 174 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 OR10V1Q8NGI7 309 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 SECTM1Q8WVN6 248 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 TMEM230Q96A57 120 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 PIMREGQ9BSJ6 248 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 RSRP1Q9BUV0 290 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 IDI2-AS1Q9NZ38 188 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 C14orf166Q9Y224 244 aaKnown RBP18.69■□□□□ 0.58
UFD1-201ENST00000263202 TACC2O95359 2948 aa18.69■□□□□ 0.58
UFD1-201ENST00000263202 SLC38A6Q8IZM9 456 aa18.68■□□□□ 0.58
UFD1-201ENST00000263202 C8orf46Q8TAG6 207 aa18.68■□□□□ 0.58
UFD1-201ENST00000263202 SSBP3Q9BWW4 388 aaPredicted RBP18.68■□□□□ 0.58
UFD1-201ENST00000263202 ARID1AO14497 2285 aa18.68■□□□□ 0.58
UFD1-201ENST00000263202 PHF1O43189 567 aaPredicted RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 MMP23AO75900 390 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 AKR1C4P17516 323 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 GNRHRP30968 328 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 TAS2R31P59538 309 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 CBX3Q13185 183 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 C4orf46Q504U0 113 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 LPCAT3Q6P1A2 487 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 OR52B4Q8NGK2 314 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 CLDND2Q8NHS1 167 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 DACT3Q96B18 629 aaPredicted RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 SLC5A7Q9GZV3 580 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 GNG12Q9UBI6 72 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 RPUSD1Q9UJJ7 312 aaKnown RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 MALRD1Q5VYJ5 2156 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 GCN1Q92616 2671 aaKnown RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 VWC2LB2RUY7 222 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 YPEL1O60688 119 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 LUMP51884 338 aaPredicted RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 DLX6P56179 175 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 MORN2Q502X0 79 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 ESCO2Q56NI9 601 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 PRAMEF5Q5TYX0 476 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 FAHD2BQ6P2I3 314 aaPredicted RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 FAHD2AQ96GK7 314 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 YPEL2Q96QA6 119 aa18.67■□□□□ 0.58
UFD1-201ENST00000263202 GPN1Q9HCN4 374 aaPredicted RBP18.67■□□□□ 0.58
UFD1-201ENST00000263202 LMO4P61968 165 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 DHODHQ02127 395 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 TMEM30BQ3MIR4 351 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 TMEM128Q5BJH2 165 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 OR10A7Q8NGE5 316 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 OR51J1Q9H342 316 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 CCL28Q9NRJ3 127 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 GFOD1Q9NXC2 390 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 SPG11Q96JI7 2443 aa18.66■□□□□ 0.58
UFD1-201ENST00000263202 OR8U9P0C7N5 309 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 ERVFRD-1P60508 538 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 UBE2MP61081 183 aaKnown RBP18.65■□□□□ 0.58
UFD1-201ENST00000263202 PPP1R1AQ13522 171 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 ZNF626Q68DY1 528 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 HEPN1Q6WQI6 88 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 ZNF818PQ6ZRF7 136 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 LY6G5BQ8NDX9 201 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 OR52M1Q8NGK5 317 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 OR8U1Q8NH10 309 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 ZNF486Q96H40 463 aaPredicted RBP18.65■□□□□ 0.58
UFD1-201ENST00000263202 BEX4Q9NWD9 120 aaPredicted RBP18.65■□□□□ 0.58
UFD1-201ENST00000263202 SNRPGP15A8MWD9 76 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 C22orf46C9J442 243 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 PIGPP57054 158 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 DSCR9P59020 149 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 DHRS2Q13268 280 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 PHLDA2Q53GA4 152 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 UTF1Q5T230 341 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 SLC2A9Q9NRM0 540 aa18.65■□□□□ 0.58
UFD1-201ENST00000263202 RBM7Q9Y580 266 aaKnown RBP18.65■□□□□ 0.58
UFD1-201ENST00000263202 IGHV4-30-2A0A087WSY4 118 aa18.64■□□□□ 0.57
UFD1-201ENST00000263202 PPIAL4CA0A0B4J2A2 164 aa18.64■□□□□ 0.57
UFD1-201ENST00000263202 HSD17B6O14756 317 aa18.64■□□□□ 0.57
UFD1-201ENST00000263202 CREBL2O60519 120 aaPredicted RBP18.64■□□□□ 0.57
UFD1-201ENST00000263202 PPIAL4GP0DN37 164 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms