RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 LUMP51884 338 aaPredicted RBP18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 RND3P61587 244 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 GNMTQ14749 295 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 SLC9A3R2Q15599 337 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 C17orf58Q2M2W7 97 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 LRRC10Q5BKY1 277 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 ZNF818PQ6ZRF7 136 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 FAM185AQ8N0U4 392 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 CCDC71LQ8N9Z2 235 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 RTN4IP1Q8WWV3 396 aaPredicted RBP18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 NAA60Q9H7X0 242 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 CCL28Q9NRJ3 127 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 SHPKQ9UHJ6 478 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 MYO18BQ8IUG5 2567 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 OVOL3O00110 214 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 GPR31O00270 319 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 OR2S2Q9NQN1 319 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 TEX13DA0A0J9YY54 714 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 DBX1A6NMT0 343 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 DVL1O14640 695 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 GOSR2O14653 212 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 SLC22A5O76082 557 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 F12P00748 615 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 IFNA2P01563 188 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 MEF2CQ06413 473 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 LIN54Q6MZP7 749 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 FAM53AQ6NSI3 398 aaPredicted RBP18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 NINJ1Q92982 152 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 GALNT14Q96FL9 552 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 LINC00574Q9H8X3 128 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 CHODLQ9H9P2 273 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 RAB9BQ9NP90 201 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 JPT1Q9UK76 154 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 LINC00312Q9Y6C7 94 aa18.94■□□□□ 0.62
SMARCB1-201ENST00000263121 KBTBD11-OT1A0A1B0GTJ5 212 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 hADV38S2A0JD32 116 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 HSD17B6O14756 317 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 OR2A4O95047 310 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 HLA-GP17693 338 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 ANKRD55Q3KP44 614 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 AVPI1Q5T686 147 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 NLRC3Q7RTR2 1065 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 OR2A7Q96R45 310 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 C19orf12Q9NSK7 152 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 PIPOXQ9P0Z9 390 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 CLN8Q9UBY8 286 aa18.93■□□□□ 0.62
SMARCB1-201ENST00000263121 ZNF729A6NN14 1252 aaPredicted RBP18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 PPP1CCP36873 323 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 EIF2B2P49770 351 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 EFNA4P52798 201 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 H2BFSP57053 126 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 LOXL3P58215 753 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 LY6G6FQ5SQ64 297 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 C11orf88Q6PI97 169 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 BVESQ8NE79 360 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 COQ8AQ8NI60 647 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 RAB1CQ92928 201 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 TIMD4Q96H15 378 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 UBE2J1Q9Y385 318 aaPredicted RBP18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 COL12A1Q99715 3063 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 IGHV3-43A0A0B4J1X8 118 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 MPPED1O15442 326 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 NDUFS7O75251 213 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 IGLV2-14P01704 120 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 GIPP09681 153 aaPredicted RBP18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 OR8U9P0C7N5 309 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 IGHV3-43DP0DP04 118 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 RPL31P62899 125 aaKnown RBP18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 C11orf91Q3C1V1 193 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 ZFP69Q49AA0 526 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 TMEM155Q4W5P6 130 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 OR5M8Q8NGP6 311 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 OR8U1Q8NH10 309 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 TAS2R3Q9NYW6 316 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 PRR13Q9NZ81 148 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 LPAR3Q9UBY5 353 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 KCNIP3Q9Y2W7 256 aa18.92■□□□□ 0.62
SMARCB1-201ENST00000263121 PPIHO43447 177 aaKnown RBP18.91■□□□□ 0.62
SMARCB1-201ENST00000263121 SIX6O95475 246 aa18.91■□□□□ 0.62
SMARCB1-201ENST00000263121 TMEM33P57088 247 aa18.91■□□□□ 0.62
SMARCB1-201ENST00000263121 DCAF12L2Q5VW00 463 aa18.91■□□□□ 0.62
SMARCB1-201ENST00000263121 KCTD9Q7L273 389 aa18.91■□□□□ 0.62
SMARCB1-201ENST00000263121 CMTM1Q8IZ96 169 aa18.91■□□□□ 0.62
SMARCB1-201ENST00000263121 A1L4Q6 167 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 SMLR1H3BR10 107 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 YPEL1O60688 119 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 C1QBP02746 253 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 OR5AC1P0C628 307 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 PLA2G2AP14555 144 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 COX6B1P14854 86 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 ZNF273Q14593 569 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 TMEM187Q14656 261 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 LTC4SQ16873 150 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 SP5Q6BEB4 398 aaPredicted RBP18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 ZNF841Q6ZN19 808 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 TBC1D26Q86UD7 250 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 AKR1E2Q96JD6 320 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 YPEL2Q96QA6 119 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 SUCNR1Q9BXA5 334 aa18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 CHIAQ9BZP6 476 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms