RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 IGFBP7Q16270 282 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 WNT10AQ9GZT5 417 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 F11RQ9Y624 299 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 KNTC1P50748 2209 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 C2CD4DB7Z1M9 353 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 RELBQ01201 579 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 FXYD3Q14802 87 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 TMEM56Q96MV1 263 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 GPR132Q9UNW8 380 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 GALNSP34059 522 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 FOXL2P58012 376 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 GGTLC2Q14390 218 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 OR2Z1Q8NG97 314 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 C14orf144Q96I85 54 aa8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 CARHSP1Q9Y2V2 147 aaKnown RBP8.51□□□□□ -1.05
CTDSPL2-201ENST00000260327 PIN1P1O15428 100 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 CRYABP02511 175 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 GCSHP23434 173 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 RNF133Q8WVZ7 376 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 NCBP2LA6PVI3 153 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 SPINT1O43278 529 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 BGLAPP02818 100 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 POU2F2P09086 479 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 ZNF519Q8TB69 540 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 WIPI2Q9Y4P8 454 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 DICER1Q9UPY3 1922 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 TAF1LQ8IZX4 1826 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 H7C2G1 150 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 MT-CO3P00414 261 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 CRYBA2P53672 197 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 ZNF260Q3ZCT1 412 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 UNC13CQ8NB66 2214 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 DNLZQ5SXM8 178 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 SLC25A34Q6PIV7 304 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 CADM4Q8NFZ8 388 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 OR10S1Q8NGN2 331 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 MRPL37Q9BZE1 423 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 EGLN1Q9GZT9 426 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 A0A1B0GU03 582 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 NGFRP08138 427 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 HIST1H1EP10412 219 aaKnown RBP8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 IL11P20809 199 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 GPR3P46089 330 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 GUSBP11Q6P575 273 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 OR2Y1Q8NGV0 311 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 MFRPQ9BY79 579 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 TUBD1Q9UJT1 453 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 ARID2Q68CP9 1835 aa8.5□□□□□ -1.05
CTDSPL2-201ENST00000260327 MSGN1A6NI15 193 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 LIPT2A6NK58 231 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 C4orf51C9J302 202 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 K7EQS6 105 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 DANCRP0C864 163 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 AGAP20933 346 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 SRIP30626 198 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 PMELP40967 661 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 ZNF841Q6ZN19 808 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 OR4A4PQ8NGN8 299 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 ST6GALNAC6Q969X2 333 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 IGHV1OR21-1A0A087WYE8 117 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 A0A1W2PRD5 423 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 A0A1W2PRF3 423 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 A0A1W2PRM7 423 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 A6NNC1 897 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 CD74P04233 296 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 RIGQ13278 110 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 ZNF784Q8NCA9 323 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 OR6X1Q8NH79 312 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 BOD1Q96IK1 185 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 PLA2G3Q9NZ20 509 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 IL36GQ9NZH8 169 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 IGSF23A1L1A6 192 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 ISXQ2M1V0 245 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 VMA21Q3ZAQ7 101 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 RBKSQ9H477 322 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 ATP23Q9Y6H3 246 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 HIST1H1BP16401 226 aaKnown RBP8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 Q8IYB0 196 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 C5orf66Q9H5L9 145 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 CABIN1Q9Y6J0 2220 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 TRAV38-1A0A0B4J264 116 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 A0A1W2PN81 502 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 HOXB1P14653 301 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 HOXA5P20719 270 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 IL36RNQ9UBH0 155 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 J3KRW8 73 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 TBX6O95947 436 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 FCGR3AP08637 254 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 EGR1P18146 543 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 TFF2Q03403 129 aa8.49□□□□□ -1.05
CTDSPL2-201ENST00000260327 PLXNB2O15031 1838 aa8.48□□□□□ -1.05
CTDSPL2-201ENST00000260327 DOCK3Q8IZD9 2030 aa8.48□□□□□ -1.05
CTDSPL2-201ENST00000260327 RTP5Q14D33 572 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms