RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 UBE2MP61081 183 aaKnown RBP13.82□□□□□ -0.2
SDCBP-201ENST00000260130 ARF6P62330 175 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 PDZD9Q8IXQ8 264 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 C12orf45Q8N5I9 185 aaPredicted RBP13.82□□□□□ -0.2
SDCBP-201ENST00000260130 LINC00052Q96N35 136 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 MFFQ9GZY8 342 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF737O75373 536 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 OR4E1P0C645 316 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 CD37P11049 281 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 SCGB2A2Q13296 93 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 RSU1Q15404 277 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 ELP2Q6IA86 826 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 TRBV23-1A0A0A0MS06 115 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 SH2D1BO14796 132 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 TOX4O94842 621 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 FGL1Q08830 312 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 KLF17Q5JT82 389 aaPredicted RBP13.81□□□□□ -0.2
SDCBP-201ENST00000260130 PXDC1Q5TGL8 231 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 HSD17B13Q7Z5P4 300 aaPredicted RBP13.81□□□□□ -0.2
SDCBP-201ENST00000260130 JAGN1Q8N5M9 183 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 SNX22Q96L94 193 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 S100A13Q99584 98 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 CHST6Q9GZX3 395 aa13.81□□□□□ -0.2
SDCBP-201ENST00000260130 AMY2AP04746 511 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 MMP9P14780 707 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 NKAIN3Q8N8D7 197 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 Q8NFD4 153 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 OR5D13Q8NGL4 314 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 LHFPL5Q8TAF8 219 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 PTX4Q96A99 478 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 SIRPDQ9H106 197 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 METTL9Q9H1A3 318 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 ONECUT1Q9UBC0 465 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
SDCBP-201ENST00000260130 A0A0D9SG52 128 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 POM121CA8CG34 1229 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 FGF2P09038 288 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 UBBP0CG47 229 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 EPHA1P21709 976 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 RPS27AP62979 156 aaKnown RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 UBA52P62987 128 aaKnown RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF660Q6AZW8 331 aaPredicted RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 LPCAT3Q6P1A2 487 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 C17orf107Q6ZR85 190 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 EIF4E3Q8N5X7 224 aaKnown RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 OR10K1Q8NGX5 313 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 IL36GQ9NZH8 169 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF736B4DX44 427 aaPredicted RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 HTR3BO95264 441 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 OR2H2O95918 312 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 FCER2P06734 321 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 GABRR1P24046 479 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 RPL31P62899 125 aaKnown RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 TUSC1Q2TAM9 212 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 LYPD6Q86Y78 171 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 KIR3DL3Q8N743 410 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 BVESQ8NE79 360 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 OR51T1Q8NGJ9 327 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 FOXRED1Q96CU9 486 aaPredicted RBP13.79□□□□□ -0.2
SDCBP-201ENST00000260130 SLC25A32Q9H2D1 315 aa13.79□□□□□ -0.2
SDCBP-201ENST00000260130 PSPNO60542 156 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 CSTBP04080 98 aaKnown RBP13.78□□□□□ -0.2
SDCBP-201ENST00000260130 CD74P04233 296 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 MGMTP16455 207 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 LMO1P25800 156 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 TMED4Q7Z7H5 227 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF546Q86UE3 836 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 FAM185AQ8N0U4 392 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 TBX15Q96SF7 602 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 PCDHB16Q9NRJ7 776 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 C19orf12Q9NSK7 152 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 DISC1C4P0D8 188 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 SIRPB1O00241 398 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 LDLRAD4O15165 306 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 IGHV4-38-2P0DP08 117 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF44P15621 663 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 RAB6AP20340 208 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 MEF2DQ14814 521 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 C1orf100Q5SVJ3 147 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 LIN54Q6MZP7 749 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 Q6P435 159 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 C1orf122Q6ZSJ8 110 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 BPIFB2Q8N4F0 458 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 PPP1R35Q8TAP8 253 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 UQCC2Q9BRT2 126 aa13.78□□□□□ -0.2
SDCBP-201ENST00000260130 TINAGL1Q9GZM7 467 aaPredicted RBP13.78□□□□□ -0.2
SDCBP-201ENST00000260130 MRPS28Q9Y2Q9 187 aaKnown RBP13.78□□□□□ -0.2
SDCBP-201ENST00000260130 TRAV40A0A0B4J280 105 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 METTL21EPA6NDL7 271 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 M0QYG6 137 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 TSPAN4O14817 238 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 DEGS1O15121 323 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 SPDEFO95238 335 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 FPR2P25090 351 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 SRSF4Q08170 494 aaKnown RBP13.77□□□□□ -0.21
SDCBP-201ENST00000260130 PDCD1Q15116 288 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 LY6G6FQ5SQ64 297 aa13.77□□□□□ -0.21
SDCBP-201ENST00000260130 TMEM200BQ69YZ2 307 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms