RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 OOEPA6NGQ2 149 aa13.35□□□□□ -0.27
RFX1-201ENST00000254325 KCNJ3P48549 501 aa13.35□□□□□ -0.27
RFX1-201ENST00000254325 BTNL3Q6UXE8 466 aa13.35□□□□□ -0.27
RFX1-201ENST00000254325 OR10Z1Q8NGY1 313 aa13.35□□□□□ -0.27
RFX1-201ENST00000254325 OR1L1Q8NH94 360 aa13.35□□□□□ -0.27
RFX1-201ENST00000254325 PLPPR1Q8TBJ4 325 aa13.35□□□□□ -0.27
RFX1-201ENST00000254325 NFYBP25208 207 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 SSX9Q7RTT3 188 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 ROS1P08922 2347 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 IGHV3-7P01780 117 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 KIR2DL2P43627 348 aaPredicted RBP13.34□□□□□ -0.27
RFX1-201ENST00000254325 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 ATRXP46100 2492 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 CDRT15L2A8MXV6 281 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 ATP6V1G2-DDX39BF2Z307 99 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 SYNGR2O43760 224 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 HBE1P02100 147 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 ZNF14P17017 642 aaPredicted RBP13.34□□□□□ -0.27
RFX1-201ENST00000254325 AKR1C3P42330 323 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 COL10A1Q03692 680 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 Q3ZCU0 254 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 ATRAIDQ6UW56 229 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 GLRX5Q86SX6 157 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 OR52L2PQ8NGH6 319 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
RFX1-201ENST00000254325 ZNF71Q9NQZ8 489 aaPredicted RBP13.34□□□□□ -0.27
RFX1-201ENST00000254325 CLEC18AA5D8T8 446 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 OR5H1A6NKK0 313 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 IQCF6A8MYZ5 107 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 UMAD1C9J7I0 102 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 UCP1P25874 307 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 ATP6V0CP27449 155 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 PPP1CCP36873 323 aaKnown RBP13.33□□□□□ -0.27
RFX1-201ENST00000254325 ELLP55199 621 aaPredicted RBP13.33□□□□□ -0.27
RFX1-201ENST00000254325 RND3P61587 244 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 LRTM2Q8N967 370 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 CLEC18CQ8NCF0 446 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 GPR146Q96CH1 333 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 ASCL3Q9NQ33 180 aa13.33□□□□□ -0.27
RFX1-201ENST00000254325 RCC2Q9P258 522 aaKnown RBP13.33□□□□□ -0.27
RFX1-201ENST00000254325 A0A1B0GU03 582 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 PIP4P1Q86T03 277 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 MOGAT3Q86VF5 341 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 CLRN3Q8NCR9 226 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 RBMXL1Q96E39 390 aaKnown RBP13.33□□□□□ -0.28
RFX1-201ENST00000254325 FGF23Q9GZV9 251 aaPredicted RBP13.33□□□□□ -0.28
RFX1-201ENST00000254325 SH3BGRL3Q9H299 93 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 FGF16O43320 207 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 IGHG3P01860 377 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 PGA5P0DJD9 388 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 H1FOOQ8IZA3 346 aaPredicted RBP13.33□□□□□ -0.28
RFX1-201ENST00000254325 PUSL1Q8N0Z8 303 aaKnown RBP13.33□□□□□ -0.28
RFX1-201ENST00000254325 EDARADDQ8WWZ3 215 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 NRIP2Q9BQI9 281 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 AIFM2Q9BRQ8 373 aa13.33□□□□□ -0.28
RFX1-201ENST00000254325 TPRP12270 2363 aaKnown RBP13.33□□□□□ -0.28
RFX1-201ENST00000254325 GPR37O15354 613 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 HBZP02008 142 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 COMMD1Q8N668 190 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 FAM74A7A6NL05 159 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 ZNF273Q14593 569 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 FAM74A3Q4VXF1 159 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 MYPOPQ86VE0 399 aaPredicted RBP13.32□□□□□ -0.28
RFX1-201ENST00000254325 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 GTF3AQ92664 365 aaKnown RBP13.32□□□□□ -0.28
RFX1-201ENST00000254325 BSCL2Q96G97 398 aaPredicted RBP13.32□□□□□ -0.28
RFX1-201ENST00000254325 BOD1Q96IK1 185 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 CADP27708 2225 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 VCANP13611 3396 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 IGHV3OR15-7A0A075B7D8 119 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 IFNA1P01562 189 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 FHITP49789 147 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 RPS16P62249 146 aaKnown RBP13.32□□□□□ -0.28
RFX1-201ENST00000254325 BAXQ07812 192 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 C1orf185Q5T7R7 199 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 LCN15Q6UWW0 184 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 GFRALQ6UXV0 394 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 C1orf162Q8NEQ5 155 aaPredicted RBP13.32□□□□□ -0.28
RFX1-201ENST00000254325 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 SEC11CQ9BY50 192 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 PRELID3BQ9Y3B1 194 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 LYL1P12980 280 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 HERPUD1Q15011 391 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 EIF2S3LQ2VIR3 472 aaKnown RBP13.32□□□□□ -0.28
RFX1-201ENST00000254325 C20orf204Q6ZNR8 217 aa13.32□□□□□ -0.28
RFX1-201ENST00000254325 CEACAM1P13688 526 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 WT1P19544 449 aaPredicted RBP13.31□□□□□ -0.28
RFX1-201ENST00000254325 RUNX1Q01196 453 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 PRAMEF5Q5TYX0 476 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 OR4A16Q8NH70 328 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 ZFP92A6NM28 416 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 TXNL1O43396 289 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 S100PBPQ96BU1 408 aa13.31□□□□□ -0.28
RFX1-201ENST00000254325 LYRM2Q9NU23 88 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms