RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 UCP2P55851 309 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 GABRA6Q16445 453 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 FAM53AQ6NSI3 398 aaPredicted RBP13.37□□□□□ -0.27
LRFN1-201ENST00000248668 PCSK4Q6UW60 755 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 OR10J5Q8NHC4 309 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 PROB1E7EW31 1015 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 TCAPO15273 167 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 OR8U8P0C7N1 319 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 OPN3Q9H1Y3 402 aaPredicted RBP13.37□□□□□ -0.27
LRFN1-201ENST00000248668 MSL2Q9HCI7 577 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 WASF3Q9UPY6 502 aa13.37□□□□□ -0.27
LRFN1-201ENST00000248668 SOX15O60248 233 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 ZNF616Q08AN1 781 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 OR8G1Q15617 311 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 SELENOHQ8IZQ5 122 aaKnown RBP13.36□□□□□ -0.27
LRFN1-201ENST00000248668 HIST1H2BAQ96A08 127 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 TAAR6Q96RI8 345 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 RHOFQ9HBH0 211 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 RPS10P5Q9NQ39 176 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 PPP1R3CQ9UQK1 317 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 CARHSP1Q9Y2V2 147 aaKnown RBP13.36□□□□□ -0.27
LRFN1-201ENST00000248668 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 TAAR5O14804 337 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 YIF1AO95070 293 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 GNMTQ14749 295 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 RNF212Q495C1 297 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 LRTM2Q8N967 370 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 KLF14Q8TD94 323 aaPredicted RBP13.36□□□□□ -0.27
LRFN1-201ENST00000248668 ATG101Q9BSB4 218 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
LRFN1-201ENST00000248668 JTBO76095 146 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 NKX2-1P43699 371 aaPredicted RBP13.35□□□□□ -0.27
LRFN1-201ENST00000248668 Q6ZT83 130 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 CMTM1Q8IZ96 169 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 TMEM68Q96MH6 324 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 GGACTQ9BVM4 153 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 PLK3Q9H4B4 646 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 SPACA1Q9HBV2 294 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 H3BP45 60 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 CST7O76096 145 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 PMELP40967 661 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 PRAMEF6Q5VXH4 476 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 Q6P435 159 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 OR8U1Q8NH10 309 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 PLEKHA2Q9HB19 425 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 MMP26Q9NRE1 261 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 USF3Q68DE3 2245 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 SFTPCP11686 197 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 CD82P27701 267 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 EIF5AP63241 154 aaKnown RBP13.35□□□□□ -0.27
LRFN1-201ENST00000248668 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
LRFN1-201ENST00000248668 HLA-DRB3P79483 266 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 ZNF610Q8N9Z0 462 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 OR4D5Q8NGN0 318 aa13.35□□□□□ -0.27
LRFN1-201ENST00000248668 WDR1O75083 606 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 PGLYRP1O75594 196 aaPredicted RBP13.34□□□□□ -0.27
LRFN1-201ENST00000248668 TUSC2O75896 110 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 IGHG3P01860 377 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 CD80P33681 288 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 PJVKQ0ZLH3 352 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 EIF5AL1Q6IS14 154 aaKnown RBP13.34□□□□□ -0.27
LRFN1-201ENST00000248668 UNQ6494/PRO21346Q6UXR6 183 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 BTBD17A6NE02 478 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
LRFN1-201ENST00000248668 PSG2P11465 335 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 TPRX1Q8N7U7 411 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 NRIP2Q9BQI9 281 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 PKIBQ9C010 78 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 COL12A1Q99715 3063 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 A0A0G2JRQ6 117 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 GPR137BO60478 399 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 PRH1P02810 166 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 SNRNP70P08621 437 aaKnown RBP13.34□□□□□ -0.27
LRFN1-201ENST00000248668 RNF150Q9ULK6 438 aa13.34□□□□□ -0.27
LRFN1-201ENST00000248668 CHD8Q9HCK8 2581 aa13.33□□□□□ -0.27
LRFN1-201ENST00000248668 A0A1W2PPH5 198 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 LRP5LA4QPB2 252 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.28
LRFN1-201ENST00000248668 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
LRFN1-201ENST00000248668 RPRMLQ8N4K4 120 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 C14orf144Q96I85 54 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 SMIM8Q96KF7 97 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 OR2W1Q9Y3N9 320 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 POMT1Q9Y6A1 747 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 NCOR2Q9Y618 2525 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 IGSF23A1L1A6 192 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 C9JQL5 133 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 MLNRO43193 412 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 SFTA3P0C7M3 94 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 EIF2S3P41091 472 aaKnown RBP13.33□□□□□ -0.28
LRFN1-201ENST00000248668 SULT1A2P50226 295 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 IL13RA2Q14627 380 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms