RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.46
HIF3A-202ENST00000244303 DEFB127Q9H1M4 99 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 KIAA1456Q9P272 454 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 TINAGQ9UJW2 476 aa12.21□□□□□ -0.46
HIF3A-202ENST00000244303 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 J3QT63 122 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 TMEM267Q0VDI3 215 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 AKR1C8PQ5T2L2 129 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 RNASE11Q8TAA1 199 aaKnown RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 BCL2L2Q92843 193 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 A0A1B0GU03 582 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 KIAA1324LA8MWY0 1029 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 SIRPB1O00241 398 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 IGHV2-70P01814 119 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 CEACAM1P13688 526 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 CD46P15529 392 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 RPS10P46783 165 aaKnown RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 CEBPGP53567 150 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 SLC10A1Q14973 349 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 OR8G1Q15617 311 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 FBXW9Q5XUX1 488 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 SP5Q6BEB4 398 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 Q6ZRM9 215 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 P4HA3Q7Z4N8 544 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 WDR86Q86TI4 376 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 MYPOPQ86VE0 399 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-202ENST00000244303 STX12Q86Y82 276 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 UBALD1Q8TB05 177 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
HIF3A-202ENST00000244303 KIAA2026Q5HYC2 2103 aa12.19□□□□□ -0.46
HIF3A-202ENST00000244303 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
HIF3A-202ENST00000244303 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
HIF3A-202ENST00000244303 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
HIF3A-202ENST00000244303 NANOS1Q8WY41 292 aaKnown RBP12.19□□□□□ -0.46
HIF3A-202ENST00000244303 MALSU1Q96EH3 234 aa12.19□□□□□ -0.46
HIF3A-202ENST00000244303 TOLLIPQ9H0E2 274 aa12.19□□□□□ -0.46
HIF3A-202ENST00000244303 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
HIF3A-202ENST00000244303 A0A1W2PR80 420 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 OR2H2O95918 312 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 SLC25A6P12236 298 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 TAS2R30P59541 319 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 RPS23P62266 143 aaKnown RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 KIAA0141Q14154 515 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 TESK1Q15569 626 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 PIP4P1Q86T03 277 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 EDARADDQ8WWZ3 215 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 WDYHV1Q96HA8 205 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 RTL8AQ9BWD3 113 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 CACNG5Q9UF02 275 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 DIDO1Q9BTC0 2240 aaKnown RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 NPIPB11E5RHQ5 1161 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 SCAF4O95104 1147 aaKnown RBP12.18□□□□□ -0.46
HIF3A-202ENST00000244303 CELA3BP08861 270 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 FBP1P09467 338 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 ICAM4Q14773 271 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 TBC1D28Q2M2D7 210 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 THNSL2Q86YJ6 484 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 SCCPDHQ8NBX0 429 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 SPRR3Q9UBC9 169 aa12.18□□□□□ -0.46
HIF3A-202ENST00000244303 H3BQ15 152 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 DFFBO76075 338 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 YIF1AO95070 293 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 CNOT4O95628 575 aaKnown RBP12.17□□□□□ -0.46
HIF3A-202ENST00000244303 MDH2P40926 338 aaKnown RBP12.17□□□□□ -0.46
HIF3A-202ENST00000244303 TLE4Q04727 773 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 SLC25A24Q6NUK1 477 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF497Q6ZNH5 498 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 RAB40CQ96S21 281 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 KCNS2Q9ULS6 477 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 RBM7Q9Y580 266 aaKnown RBP12.17□□□□□ -0.46
HIF3A-202ENST00000244303 GTF3C1Q12789 2109 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 IGHV3-64DA0A0J9YX35 117 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 WNT2P09544 360 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 IAPPP10997 89 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF16P17020 682 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-202ENST00000244303 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 ARG2P78540 354 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 CYB561D1Q8N8Q1 229 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 CLDND2Q8NHS1 167 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 OR2J1Q9GZK6 312 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 UNKLQ9H9P5 680 aaKnown RBP12.17□□□□□ -0.46
HIF3A-202ENST00000244303 WSB1Q9Y6I7 421 aa12.17□□□□□ -0.46
HIF3A-202ENST00000244303 URB1O60287 2271 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 H0YL77 283 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 PPIHO43447 177 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 SMPD2O60906 423 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms